DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and Kdm6b

DIOPT Version :9

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:XP_030101676.1 Gene:Kdm6b / 216850 MGIID:2448492 Length:1642 Species:Mus musculus


Alignment Length:155 Identity:31/155 - (20%)
Similarity:45/155 - (29%) Gaps:64/155 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   319 NVYKKLLDFEPDNAIAKKAVEKLTSMLGEVAPSSATRLIIEEIDPP------------------- 364
            |:.|.|     |.:|.|:..::.....| |||....:.....:.||                   
Mouse   699 NIMKML-----DESIRKEEEQQQQQEAG-VAPPPPLKEPFASLQPPFPSDTAPATTTAAPTTATT 757

  Fly   365 -QLKTSEPKKEAEKSEPTVVKKPEPVVSAKKPPPIKDYDLAELVKPNRMVKSNLVSAAEALGNKM 428
             ...|:...:|.||..|..:..|.|:  ||.|||.:                             
Mouse   758 TTTTTTTTTQEEEKKPPPALPPPPPL--AKFPPPPQ----------------------------- 791

  Fly   429 QASKGGAPKKPQSPPMTPKETLLRL 453
                   |:.|..||.:|...|..|
Mouse   792 -------PQPPPPPPASPASLLKSL 809

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 TPR_11 229..295 CDD:290150
TPR repeat 229..257 CDD:276809
TPR repeat 262..293 CDD:276809
TPR_11 266..329 CDD:290150 3/9 (33%)
TPR 266..297 CDD:197478
TPR repeat 298..326 CDD:276809 3/6 (50%)
Kdm6bXP_030101676.1 TPR repeat 106..136 CDD:276809
JmjC 1342..1406 CDD:214721
JmjC 1376..1484 CDD:396791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1124
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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