Protein Alignment Spag1 and rpap-3

DIOPT Version :9

• Sequence 1: NP_651514.1
• Gene: Spag1 / 43239
• FlyBaseID: FBgn0039463
• Length: 469
• Species: Drosophila melanogaster
• Sequence 2: NP_501282.1
• Gene: rpap-3 / 183187
• WormBaseID: WBGene00016375
• Length: 297
• Species: Caenorhabditis elegans
• Alignment Length: 226
• Identity: 61/226 - (26%)
• Similarity: 97/226 - (42%)
• Gaps: 50/226 - (22%)

  Fly   224 EKEQFAERHRLRGNESFKAKEYENAIEEYNCSIIYDPENAVHAYNNRAVAHLKLKKYFSAISDCQ 288
            |:::.|:|.:.:|||:||.|:|..|:..|:.|:.:.|:..|  ::|||.|.|.......|..||.
 Worm     3 EEKKIAQRLKEQGNEAFKKKKYHKAMTIYSKSLEHWPDPIV--FSNRAQAGLNADLPLLAQIDCT 65

  Fly   289 ACLQIDPMNIKAHLRMAEAHNAEGKHLESLNVY-------KKLLDFEPDNAIAKKAVEKLTSMLG 346
            |.|.:|....||:.|.|:|..|       |.:|       |....:..|..:.::|    ..:.|
 Worm    66 AALNLDSTAAKAYYRRAQAFKA-------LELYELAERDMKTCFKYSNDPNMERQA----NDLKG 119

  Fly   347 EVAPSSATRLIIEEIDPPQLKTSEPKKEAEK-------------SEPTVVKKPE-----PVVSAK 393
                    :..::.||.|.::..|..:..||             .|..|.::||     |....|
 Worm   120 --------KKNVQVIDLPSIERDEYLQSDEKFTKIDFTYNIEKIEEIIVAEEPENDNIVPKYITK 176

  Fly   394 KPPPIKDYDLAELVKPNRMVK--SNLVSAAE 422
            .||..|||.  :.|....|:|  .:|:..||
 Worm   177 LPPHPKDYQ--DFVGAVNMLKRAQSLLPLAE 205

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Spag1	NP_651514.1	TPR_11	229..295	CDD:290150	24/65 (37%)
		TPR repeat	229..257	CDD:276809	12/27 (44%)
		TPR repeat	262..293	CDD:276809	11/30 (37%)
		TPR_11	266..329	CDD:290150	20/69 (29%)
		TPR	266..297	CDD:197478	11/30 (37%)
		TPR repeat	298..326	CDD:276809	9/34 (26%)
rpap-3	NP_501282.1	3a0801s09	2..>98	CDD:273380	34/103 (33%)
		TPR repeat	8..36	CDD:276809	12/27 (44%)
		TPR repeat	40..70	CDD:276809	11/31 (35%)
		TPR repeat	75..103	CDD:276809	9/34 (26%)
		RPAP3_C	180..271	CDD:372776	9/28 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D153676at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	3	2.880