DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and sti-1

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001367444.1 Gene:sti-1 / 178587 WormBaseID:WBGene00019983 Length:320 Species:Caenorhabditis elegans


Alignment Length:219 Identity:59/219 - (26%)
Similarity:97/219 - (44%) Gaps:47/219 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   177 LNEERDQEQREKIISNHSKSVTTDKLQSERDSLYERLQAQLKNLSQLE--KEQFAERHRLRGNES 239
            |:|.||.|..:|:                     :.|:.|||...:|.  ..:.|:..:.:|||.
 Worm   107 LSEFRDPELVKKV---------------------KELEKQLKAAERLAYINPELAQEEKNKGNEY 150

  Fly   240 FKAKEYENAIEEYNCSIIYDPENAVHAYNNRAVAHLKLKKYFSAISDCQACLQIDPMNIKAHLRM 304
            ||..:|..|:..||.::..|||||: .|:|||....||.::..|:.||..|:::|...||.::|.
 Worm   151 FKKGDYPTAMRHYNEAVKRDPENAI-LYSNRAACLTKLMEFQRALDDCDTCIRLDSKFIKGYIRK 214

  Fly   305 AEAHNAEGKHLESLNVYKKLLDFEPDNAIAKKAVE-------------KLTSM----LGEVAPSS 352
            |....|..:..::...|:..|..:|.|..|::.|.             |..|:    :.|:....
 Worm   215 AACLVAMREWSKAQRAYEDALQVDPSNEEAREGVRNCLRSNDEDPEKAKERSLADPEVQEILRDP 279

  Fly   353 ATRLIIEEI--DP----PQLKTSE 370
            ..|:|:|::  ||    ..||..|
 Worm   280 GMRMILEQMSNDPGAVREHLKNPE 303

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 48/165 (29%)
TPR repeat 229..257 CDD:276809 10/27 (37%)
TPR repeat 262..293 CDD:276809 12/30 (40%)
TPR repeat 298..326 CDD:276809 6/27 (22%)
sti-1NP_001367444.1 TPR repeat 5..33 CDD:276809
LapB 11..264 CDD:442196 48/178 (27%)
TPR repeat 38..68 CDD:276809