DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and Aip

DIOPT Version :9

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001263213.1 Gene:Aip / 11632 MGIID:109622 Length:330 Species:Mus musculus


Alignment Length:76 Identity:18/76 - (23%)
Similarity:36/76 - (47%) Gaps:2/76 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   269 NRAVAHLKLKKYFSAISDCQACLQIDPMNIKAHLRMAEAHNAEGKHLESLNVYKKLLDFEPDNAI 333
            |.....|..::|:..:..|.:.|.....|:||:.:..:||.|.....|:...:.|:|:.:|  |:
Mouse   236 NYCQCKLVAQEYYEVLDHCSSILNKYDDNVKAYFKRGKAHAAVWNAQEAQADFAKVLELDP--AL 298

  Fly   334 AKKAVEKLTSM 344
            |.....:|.::
Mouse   299 APVVSRELRAL 309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 TPR_11 229..295 CDD:290150 5/25 (20%)
TPR repeat 229..257 CDD:276809
TPR repeat 262..293 CDD:276809 5/23 (22%)
TPR_11 266..329 CDD:290150 14/59 (24%)
TPR 266..297 CDD:197478 5/27 (19%)
TPR repeat 298..326 CDD:276809 7/27 (26%)
AipNP_001263213.1 FKBP_C 29..>90 CDD:418595
TPR 1. /evidence=ECO:0000255 179..212
TPR repeat 181..225 CDD:276809
TPR repeat 230..260 CDD:276809 5/23 (22%)
TPR 2. /evidence=ECO:0000250|UniProtKB:O00170 231..264 5/27 (19%)
TPR 3. /evidence=ECO:0000255, ECO:0000255|PROSITE-ProRule:PRU00339 265..298 9/34 (26%)
TPR repeat 265..293 CDD:276809 7/27 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1535
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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