DRSC/TRiP Functional Genomics Resources

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Protein Alignment Spag1 and Ttc16

DIOPT Version :10

Sequence 1:NP_651514.1 Gene:Spag1 / 43239 FlyBaseID:FBgn0039463 Length:469 Species:Drosophila melanogaster
Sequence 2:NP_001397207.2 Gene:Ttc16 / 100362059 RGDID:2318922 Length:822 Species:Rattus norvegicus


Alignment Length:363 Identity:80/363 - (22%)
Similarity:135/363 - (37%) Gaps:93/363 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 DPDEEILRMDLNEERDQEQREKIISNHSKSVTTDKLQSERDSLYERLQAQLKNLSQLEKEQFAER 231
            ||:..:.|..|  .|..:|.:..:.:..|::  |.:...:|:|.::.|.||    .|....||..
  Rat   298 DPNFFLFRGTL--RRRLQQYDPAVEDFLKAL--DMMTESQDNLVKQAQRQL----LLTYNDFAVH 354

  Fly   232 HRLRGNESFKAKEYENAIEEYNCSIIYDPENAVHAYNNRAVAHLKLKKYFSAISDCQACLQIDPM 296
            ..|.|       .|:.::...| ..|.|.:|....|.||.....:|.....|.:|.:..|.:.|:
  Rat   355 CYLHG-------AYQESVLLLN-KAIRDEQNEKGLYINRGDCFYQLGNLAFAEADYKQALALSPL 411

  Fly   297 NIKAHLRM-------------------AEAHNAEG-KHLESLNVY-----------KKLLDFEPD 330
            :..|:|||                   ||.|.:|. :|......|           :.:|....|
  Rat   412 DEGANLRMGVLQEKMGFCQQKHRQFQTAEEHFSEAIRHNPQKPQYYLHRAKCRQFLQNILGARQD 476

  Fly   331 NAIA--------KKA-----------VE-KLTSMLGEVAPSSATRLIIEEIDP----PQ---LKT 368
            .|..        |.|           || .|.|.:.|:|....||:|  |..|    ||   |:.
  Rat   477 VATVLLLNPNYPKMAAMMNTLFPGMTVEGALKSRVAELARLQLTRMI--ENGPRRNYPQSIVLQR 539

  Fly   369 SEPKKEAE------KSEPTVVKKPEPVVSAKKPPPIKDYDLAELVKPNRMVKSNLV--SAAEALG 425
            ...:::|:      |.||..:.|.|.|...:.|...|...:.::.:....:..:.|  :::.::.
  Rat   540 LMERQKAQAMVRSWKKEPPEIPKEEEVTIFQAPEVAKGKKVRKIPRKRTSLTDSYVDQTSSGSVF 604

  Fly   426 NKMQASKGGAPKKPQS--------PPMTPKETLLRLPQ 455
            :.|..|..| |:...|        .|::..|::|..||
  Rat   605 SIMSISTSG-PEMSTSREYMSTSHTPISSSESILPKPQ 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Spag1NP_651514.1 NlpI <229..373 CDD:443815 45/201 (22%)
TPR repeat 229..257 CDD:276809 5/27 (19%)
TPR repeat 262..293 CDD:276809 8/30 (27%)
TPR repeat 298..326 CDD:276809 10/58 (17%)
Ttc16NP_001397207.2 None

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