DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ets97D and elk1

DIOPT Version :9

Sequence 1:NP_001263000.1 Gene:Ets97D / 43236 FlyBaseID:FBgn0004510 Length:484 Species:Drosophila melanogaster
Sequence 2:XP_696294.3 Gene:elk1 / 567895 ZFINID:ZDB-GENE-090529-5 Length:521 Species:Danio rerio


Alignment Length:149 Identity:62/149 - (41%)
Similarity:83/149 - (55%) Gaps:29/149 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   328 SSMNPSNYTTIGSGNNGQVQLWQFLLEILTDCEHTDVIEWVGTEGEFKLTDPDRVARLWGEKKNK 392
            |:|:||            :.||||||.:|.|.....:|.|...:|||||.|.:.||||||.:|||
Zfish     8 SAMDPS------------ITLWQFLLHLLDDQNQKHLISWTSGDGEFKLLDAEEVARLWGLRKNK 60

  Fly   393 PAMNYEKLSRALRYYYDGDMISKVSGKRFAYKFDCDLKLLIGY-DANELSTLVSEGKTAPERVAA 456
            ..|||:|||||||||||.::|.||||::|.|||       :.| |.|....|  :|....:|.:.
Zfish    61 TNMNYDKLSRALRYYYDKNIIKKVSGQKFVYKF-------VTYPDPNSADGL--KGTEDSQRAST 116

  Fly   457 TETITEDTXHGELKLKEEP 475
            .|.:       ||.::.:|
Zfish   117 GEKL-------ELSIQTKP 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ets97DNP_001263000.1 GABP-alpha 48..123 CDD:288472
SAM_PNT-GABP-alpha 184..272 CDD:176084
ETS 345..429 CDD:197710 48/83 (58%)
elk1XP_696294.3 ETS 13..98 CDD:197710 50/103 (49%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3806
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.