DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ets97D and Gabpa

DIOPT Version :9

Sequence 1:NP_001263000.1 Gene:Ets97D / 43236 FlyBaseID:FBgn0004510 Length:484 Species:Drosophila melanogaster
Sequence 2:XP_008766806.1 Gene:Gabpa / 363735 RGDID:1310802 Length:456 Species:Rattus norvegicus


Alignment Length:457 Identity:176/457 - (38%)
Similarity:253/457 - (55%) Gaps:58/457 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SDELIRRLSVGGALEEVIASEMFEDSIDVETEAEPDDIIIVHMDIREPLSMLKSLVEQKIGVCLN 72
            ::||| .:.:.|..:    .|..|:|| ||....|.:.:...:||.||:..||.|:|.::...|:
  Rat     6 AEELI-EIEIDGTEK----PECTEESI-VEQTYAPAECVSQAIDINEPIGNLKKLLEPRLQCSLD 64

  Fly    73 YYTFWLQDAQELESHKNLVDQCVKGEGLVQINVQI---QTIRKRINIADVLKPTEAALAALAEEV 134
            .:...|||.| |:..::|.||.||.:|.||::||:   |.|..::||.:::|..|..      ||
  Rat    65 AHEICLQDIQ-LDPDRSLFDQGVKTDGTVQLSVQVISYQGIEPKLNILEIVKTAETV------EV 122

  Fly   135 VGQLSPPETASQKSSSSESPIKTPLKRMHKEDSEEESVEGKDVKPVLNWVLDSK-FKREQIRLKI 198
            |.........::.....|:.:.|.....|.....:|:.|     .|..|....: :::||.||.|
  Rat   123 VIDPDAHHAEAEAHLVEEAQVITLDGTKHITTISDETSE-----QVTRWAAALEGYRKEQERLGI 182

  Fly   199 PEAANEWTHAHVTYWLEWAVKQFELVGINMSDWQMNGQELCAMTHEEFNQKLPRDPGNIFWTHLQ 263
            |....:|:...|.:|:.|.:|:|.:..|:::...::|:|||::..|:|.|::||  |.|.|:||:
  Rat   183 PYDPIQWSTDQVLHWVVWVMKEFSMTDIDLTTLNISGRELCSLNQEDFFQRVPR--GEILWSHLE 245

  Fly   264 LLKECNFVSVVHKRAEEQRKPK-----QP-RIMSANSIST--------NSGGSLSLEQRIMRKSY 314
            ||::....|      :||:..:     || :|:.|:..|.        ||....:..||..|.|.
  Rat   246 LLRKYVLAS------QEQQMNEIVTIDQPVQIIPASVPSATPTTIKVINSSAKAAKVQRSPRISG 304

  Fly   315 QSVKSSDSVESTTSSMNPSNYTTIGSGNNGQVQLWQFLLEILTDCEHTDVIEWVGTEGEFKLTDP 379
            :...|            |.|.|.:  |||||:||||||||:|||.:..|.|.|||.||||||..|
  Rat   305 EDRSS------------PGNRTDL--GNNGQIQLWQFLLELLTDKDARDCISWVGDEGEFKLNQP 355

  Fly   380 DRVARLWGEKKNKPAMNYEKLSRALRYYYDGDMISKVSGKRFAYKFDCDLKLLIGYDANELSTLV 444
            :.||:.||::||||.|||||||||||||||||||.||.||||.|||.||||.||||.|.||:.||
  Rat   356 ELVAQKWGQRKNKPTMNYEKLSRALRYYYDGDMICKVQGKRFVYKFVCDLKTLIGYSAAELNRLV 420

  Fly   445 SE 446
            :|
  Rat   421 TE 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ets97DNP_001263000.1 GABP-alpha 48..123 CDD:288472 29/77 (38%)
SAM_PNT-GABP-alpha 184..272 CDD:176084 29/88 (33%)
ETS 345..429 CDD:197710 61/83 (73%)
GabpaXP_008766806.1 GABP-alpha 40..119 CDD:288472 29/79 (37%)
SAM_PNT-GABP-alpha 168..254 CDD:176084 29/87 (33%)
ETS 321..405 CDD:197710 61/83 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349366
Domainoid 1 1.000 130 1.000 Domainoid score I5108
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1543
Inparanoid 1 1.050 267 1.000 Inparanoid score I2955
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243757at33208
OrthoFinder 1 1.000 - - FOG0008382
OrthoInspector 1 1.000 - - oto98800
orthoMCL 1 0.900 - - OOG6_108754
Panther 1 1.100 - - LDO PTHR11849
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X6369
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.900

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