DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ets97D and ets2

DIOPT Version :9

Sequence 1:NP_001263000.1 Gene:Ets97D / 43236 FlyBaseID:FBgn0004510 Length:484 Species:Drosophila melanogaster
Sequence 2:NP_001120533.1 Gene:ets2 / 100145687 XenbaseID:XB-GENE-6084129 Length:471 Species:Xenopus tropicalis


Alignment Length:455 Identity:138/455 - (30%)
Similarity:187/455 - (41%) Gaps:134/455 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   110 IRKRINIADVLKPTE--AALAALAEEVVGQLSPPETASQKSSSSESPIKTPLKRMHKEDSEEESV 172
            ::::....:|..||.  :.|.:..||.....:..::.|..|||.|.|:.||..:.....:.:::.
 Frog    23 LKRQFAFDNVSVPTSLYSGLFSAYEEEQAVPTGLDSYSHDSSSCELPLLTPCSKAVMSQALKDTF 87

  Fly   173 EGKDVKPVLNWVLDSKFKREQIRLKIPEAANEWTHAHVTYWLEWAVKQFELVGINMSDWQMNGQE 237
            .|              |.:|:.||.||.....|...||..||.||.|:|.|..:|...:.|||.|
 Frog    88 NG--------------FTKERCRLCIPGNPWLWDENHVFQWLLWAAKEFSLENVNFQKFLMNGHE 138

  Fly   238 LCAMTHEEFNQKLPRDPGNIFWTHL-QLLKE--------------------------CNF-VSVV 274
            ||::..|.|....|...|:|.|.|| :::||                          .|| ...:
 Frog   139 LCSLGKERFLALAPDFVGDILWEHLEEMMKEHQVKAQESYIDHSNRDSVNQWMNADSLNFPADPL 203

  Fly   275 HKRAEEQRKPK-------------QPRI-------------------------------MSANSI 295
            ...|:....||             ||.:                               |:|...
 Frog   204 QCGAQVHNYPKNGMFNDMCSVPTGQPLLTPKQEFQQYPSSCLKSRAVNYPPSQDFARSNMNALLS 268

  Fly   296 STNSG----------GSLSLEQ-RIMRKSY---------QSVKSSDSVESTTSS--------MNP 332
            |.|||          |:.|.|. ..|.:|:         |.|.|.||.|...|.        |:.
 Frog   269 SLNSGKLRDYDSGDSGTESFESTESMLQSWTSQSSLVDMQRVPSYDSFEEDGSQALCLNKPPMSF 333

  Fly   333 SNY------------------TTIGSGNNGQVQLWQFLLEILTDCEHTDVIEWVGTEGEFKLTDP 379
            .:|                  ...|...:|.:||||||||:|||......|.|.|...|||||||
 Frog   334 KDYIQDRCEPAELGKPVIPASILAGFTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLTDP 398

  Fly   380 DRVARLWGEKKNKPAMNYEKLSRALRYYYDGDMISKVSGKRFAYKFDCDLKLLIGYDANELSTLV 444
            |.|||.||::||||.||||||||.||||||.::|.|.||||:.|:|.|||..|:||..:||..::
 Frog   399 DEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTSGKRYVYRFVCDLHNLLGYTPDELHAML 463

  Fly   445  444
             Frog   464  463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ets97DNP_001263000.1 GABP-alpha 48..123 CDD:288472 1/12 (8%)
SAM_PNT-GABP-alpha 184..272 CDD:176084 35/115 (30%)
ETS 345..429 CDD:197710 54/83 (65%)
ets2NP_001120533.1 SAM_superfamily 85..173 CDD:301707 34/101 (34%)
ETS 364..449 CDD:197710 55/84 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243757at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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