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Protein Alignment ro and gsx1
DIOPT Version :9
Sequence 1: | NP_524521.1 |
Gene: | ro / 43234 |
FlyBaseID: | FBgn0003267 |
Length: | 350 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001039254.1 |
Gene: | gsx1 / 734120 |
XenbaseID: | XB-GENE-855502 |
Length: | 243 |
Species: | Xenopus tropicalis |
Alignment Length: | 183 |
Identity: | 56/183 - (30%) |
Similarity: | 73/183 - (39%) |
Gaps: | 57/183 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 114 YPQHPSQQHQQHHHHHHHPPQLVHQKLSYV--------------SPPPAIAAGGAANPVLPHAF- 163
|..||: |..|..|....|.:.|.: .|||.| |:|..:|
Frog 29 YAVHPT------HPLHGLPAGSCHSRKSGLLCVCPMCVTASHLHPPPPGI-------PLLKASFS 80
Fly 164 -------PAGFPSDPHFSAGFSA------FLARRRRKEGRQ----------------RRQRTTFS 199
|||.......|.|.:. :.|.....:.|| :|.||.|:
Frog 81 SFGTQYCPAGLGRQHSASTGINVSHGPALYQAAYPLPDPRQFHCISVDSSPSQLSSSKRMRTAFT 145
Fly 200 TEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEKA 252
:.|.|.||.||..|.|:||.||.|:|..|.|:|.|:||||||||.|.|:..|:
Frog 146 STQLLELEREFASNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKS 198
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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