Protein Alignment ro and Hoxa6

DIOPT Version :9

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: NP_001178016.1
• Gene: Hoxa6 / 685732
• RGDID: 1590236
• Length: 233
• Species: Rattus norvegicus
• Alignment Length: 206
• Identity: 63/206 - (30%)
• Similarity: 82/206 - (39%)
• Gaps: 58/206 - (28%)

  Fly    77 PYHSDGGSVSSPDISIS-----DERTSLAA-------YPAYDFYGHAKDY----PQHPSQQHQQH 125
            |:.:..|:.|.||.:.:     .:..|:.|       |.|..||.. ||.    |...|:|....
  Rat    37 PFPASYGASSLPDKTYTSPCFYQQSNSVLACNRASYEYGASCFYSD-KDLSGASPSGNSKQRGPG 100

  Fly   126 HHHHHHPPQLVHQKLSYVSPPPAIAAGGA----------ANPVLPHAFPAGFPSDPHFSAGFSAF 180
            .:.|..|.|       ...|..:...|.|          .:||.|                   :
  Rat   101 DYLHFSPEQ-------QYKPDSSSVQGKALHEEGTDRKYTSPVYP-------------------W 139

  Fly   181 LARRRRKEG-----RQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQ 240
            :.|.....|     ..||.|.|::..|||.||.|||.|.|::|.||.|:|..|.|||.|||||||
  Rat   140 MQRMNSCAGAVYGSHGRRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQ 204

  Fly   241 NRRAKDKRIEK 251
            |||.|.|:..|
  Rat   205 NRRMKWKKENK 215

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeobox	196..247	CDD:278475	31/50 (62%)
Hoxa6	NP_001178016.1	Homeobox	159..212	CDD:395001	32/52 (62%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.900