Protein Alignment ro and ceh-63

DIOPT Version :10

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: NP_001123094.1
• Gene: ceh-63 / 6418830
• WormBaseID: WBGene00045215
• Length: 152
• Species: Caenorhabditis elegans
• Alignment Length: 195
• Identity: 53/195 - (27%)
• Similarity: 75/195 - (38%)
• Gaps: 80/195 - (41%)

  Fly   104 AYDFYGHAKDYPQHPSQQHQQHHHHHHHPPQLVHQKLSYVSPPPAIAAGGAANPVLPHAFPAGFP 168
            ||||:..:.|  .:.|||                  :..:.|||
 Worm    13 AYDFFPWSND--TNSSQQ------------------IKNIKPPP--------------------- 36

  Fly   169 SDPHFSAGFSAFLARRRRKEGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTET 233
                              |...:..:||||::||...||:||.:||||.:.||.|||:|:.|||.
 Worm    37 ------------------KRSNRPTKRTTFTSEQVTLLELEFAKNEYICKDRRGELAQTIELTEC 83

  Fly   234 QIKIWFQNRRAKDKR----IEKAQI--------------DQHYRNFVVANGFMSSIMGQAATTMP 280
            |:|.||||||.|.:|    :.|:.:              .||.:|.   ..|..|.....|.::|
 Worm    84 QVKTWFQNRRTKKRRCTSPLRKSMMKKSDERSPSPQNPSSQHVQNL---QTFFHSWPSHFAYSLP 145

  Fly   281  280
             Worm   146  145

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeodomain	196..248	CDD:459649	31/51 (61%)
ceh-63	NP_001123094.1	Homeodomain	44..98	CDD:459649	32/53 (60%)