DRSC/TRiP Functional Genomics Resources

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Protein Alignment ro and hoxa5a

DIOPT Version :10

Sequence 1:NP_524521.1 Gene:ro / 43234 FlyBaseID:FBgn0003267 Length:350 Species:Drosophila melanogaster
Sequence 2:XP_073787191.1 Gene:hoxa5a / 58055 ZFINID:ZDB-GENE-000823-9 Length:265 Species:Danio rerio


Alignment Length:64 Identity:37/64 - (57%)
Similarity:45/64 - (70%) Gaps:2/64 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 EGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEK 251
            ||  :|.||.::..|||.||.|||.|.|::|.||.|:|.||.|:|.||||||||||.|.|:..|
Zfish   189 EG--KRPRTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKKDNK 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
roNP_524521.1 Homeodomain 196..248 CDD:459649 31/51 (61%)
hoxa5aXP_073787191.1 None

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