Protein Alignment ro and hoxa1a

DIOPT Version :9

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: NP_571611.1
• Gene: hoxa1a / 58051
• ZFINID: ZDB-GENE-000823-5
• Length: 329
• Species: Danio rerio
• Alignment Length: 231
• Identity: 70/231 - (30%)
• Similarity: 96/231 - (41%)
• Gaps: 78/231 - (33%)

  Fly    83 GSVSSP-DISISDERTSLAAYPAYDF------YGH---------AKDYPQ--------HPSQQHQ 123
            ||..|| .:||     :.:|:|:|..      |.|         :..:||        :.|....
Zfish    71 GSYQSPGTLSI-----TYSAHPSYGTQSFCTGYNHYALNQDVESSVSFPQCGPLVYSGNISSTVV 130

  Fly   124 QHHHHHH-------HPPQLVHQKLSYVSPPPAIAA--------GGAANPVLPHAFP--------- 164
            ||.||.|       |    :|.:..|.|.....::        .|.:||:.|...|
Zfish   131 QHRHHRHGYSSGNVH----LHGQFQYGSATYGNSSDQANLTFVAGCSNPLSPLHVPHHDACCSPL 191

  Fly   165 -AGFPSDPHF-------------SAGFSAFLARRRRKEGRQRRQRTTFSTEQTLRLEVEFHRNEY 215
             .|.|:...|             .||...|       .|:....||.|||:|...||.|||.|:|
Zfish   192 SDGVPTGQTFDWMKVKRNPPKTGKAGEYGF-------GGQPNTVRTNFSTKQLTELEKEFHFNKY 249

  Fly   216 ISRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEK 251
            ::|:||.|:|.:|:|.|||:||||||||.|.|:.||
Zfish   250 LTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREK 285

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeobox	196..247	CDD:278475	31/50 (62%)
hoxa1a	NP_571611.1	Antp-type hexapeptide	200..205		1/4 (25%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	208..227		4/25 (16%)
		Homeobox	229..281	CDD:278475	32/51 (63%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	277..329		5/9 (56%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45946
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	1.100