Protein Alignment ro and hoxa4a

DIOPT Version :10

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: NP_571610.1
• Gene: hoxa4a / 58050
• ZFINID: ZDB-GENE-000823-4
• Length: 245
• Species: Danio rerio
• Alignment Length: 210
• Identity: 65/210 - (30%)
• Similarity: 89/210 - (42%)
• Gaps: 50/210 - (23%)

  Fly    72 PPCDTPYHSDG-GSVSS--------PDISISDERTSLAAYPAYDFYGHAKDYPQHPSQQHQQHHH 127
            |||: .||.:| ..|||        |.....:|    |:||..::...:.||....:........
Zfish    18 PPCE-EYHQNGYMPVSSDYYERPKDPGFPHHEE----ASYPRSNYQEQSYDYGNVSTNDLNDFSD 77

  Fly   128 HHHHPPQLVHQK------------------LSYVSPPPAIAAGGAANPVLPHAFPAGFPSDPH-- 172
            .||..||.|.|.                  .|.||.    |..|:.....|..:|  :....|
Zfish    78 RHHAQPQSVSQNHGPRLTTESCVGSDGNKDCSLVSD----ALPGSQKSKEPVVYP--WMKKVHVN 136

  Fly   173 -FSAGFSAFLARRRRKEGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIK 236
             .:|.:|.         |..:|.||.::.:|.|.||.|||.|.|::|.||.|:|.|:.|:|.|:|
Zfish   137 TVTASYSG---------GVPKRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVK 192

  Fly   237 IWFQNRRAKDKRIEK 251
            |||||||.|.|:..|
Zfish   193 IWFQNRRMKWKKDHK 207

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeodomain	196..248	CDD:459649	28/51 (55%)
hoxa4a	NP_571610.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	34..99		13/68 (19%)
		Antp-type hexapeptide	126..131		1/6 (17%)
		Homeodomain	148..204	CDD:459649	30/55 (55%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	205..245		1/3 (33%)