Protein Alignment ro and hoxa4a

DIOPT Version :9

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: NP_571610.1
• Gene: hoxa4a / 58050
• ZFINID: ZDB-GENE-000823-4
• Length: 245
• Species: Danio rerio
• Alignment Length: 210
• Identity: 65/210 - (30%)
• Similarity: 89/210 - (42%)
• Gaps: 50/210 - (23%)

  Fly    72 PPCDTPYHSDG-GSVSS--------PDISISDERTSLAAYPAYDFYGHAKDYPQHPSQQHQQHHH 127
            |||: .||.:| ..|||        |.....:|    |:||..::...:.||....:........
Zfish    18 PPCE-EYHQNGYMPVSSDYYERPKDPGFPHHEE----ASYPRSNYQEQSYDYGNVSTNDLNDFSD 77

  Fly   128 HHHHPPQLVHQK------------------LSYVSPPPAIAAGGAANPVLPHAFPAGFPSDPH-- 172
            .||..||.|.|.                  .|.||.    |..|:.....|..:|  :....|
Zfish    78 RHHAQPQSVSQNHGPRLTTESCVGSDGNKDCSLVSD----ALPGSQKSKEPVVYP--WMKKVHVN 136

  Fly   173 -FSAGFSAFLARRRRKEGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIK 236
             .:|.:|.         |..:|.||.::.:|.|.||.|||.|.|::|.||.|:|.|:.|:|.|:|
Zfish   137 TVTASYSG---------GVPKRSRTAYTRQQALELEKEFHFNRYLTRRRRVEIAHTMCLSERQVK 192

  Fly   237 IWFQNRRAKDKRIEK 251
            |||||||.|.|:..|
Zfish   193 IWFQNRRMKWKKDHK 207

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeobox	196..247	CDD:278475	28/50 (56%)
hoxa4a	NP_571610.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	34..99		13/68 (19%)
		Antp-type hexapeptide	126..131		1/6 (17%)
		Homeobox	150..203	CDD:278475	29/52 (56%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	205..245		1/3 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	2.000