Protein Alignment ro and hoxa3a

DIOPT Version :9

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: NP_571609.1
• Gene: hoxa3a / 58049
• ZFINID: ZDB-GENE-000823-3
• Length: 411
• Species: Danio rerio
• Alignment Length: 260
• Identity: 69/260 - (26%)
• Similarity: 90/260 - (34%)
• Gaps: 95/260 - (36%)

  Fly    75 DTPYHSDGGSVSSPDISISDERTSLAAYPAYDFYG---------------HAKDYPQHPSQQHQQ 124
            ::.||....|:.||.||.....::..:.......|               .|...|..||..:|
Zfish    40 ESEYHRPACSLQSPGISAGLHTSNEMSEVCQQINGTQATVTDTSDNKQPPTAPSGPSSPSSLNQ- 103

  Fly   125 HHHHHHHPPQL-------VHQKLSYVSPPPAIAAGGAANPVLPHAFP------------------ 164
                   .|.:       ||     |||.|:         ...|.||
Zfish   104 -------IPNIDSAAKNPVH-----VSPTPS---------TRKHIFPWMKESRQNTKQKSCSIIS 147

  Fly   165 ----AGFPSDPHFSAGFSAFLARRRRKEGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELA 225
                ||....|..||.              .:|.||.:::.|.:.||.|||.|.|:.|.||.|:|
Zfish   148 VESCAGRQKSPPGSAA--------------SKRARTAYTSAQLVELEKEFHFNRYLCRPRRVEMA 198

  Fly   226 ETLRLTETQIKIWFQNRRAKDKRIEKAQIDQHYRNFVVANGFMSSIMGQ---AATTMPPGGVTGG 287
            ..|.|||.||||||||||.|.|:.:|..            |.|.|...|   :..::..||..||
Zfish   199 NLLNLTERQIKIWFQNRRMKYKKDQKGL------------GMMPSPGAQSPHSPVSLSSGGGGGG 251

  Fly   288  287
            Zfish   252  251

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeobox	196..247	CDD:278475	29/50 (58%)
hoxa3a	NP_571609.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	79..126		12/68 (18%)
		Antp-type hexapeptide	127..132		2/4 (50%)
		Homeobox	168..220	CDD:278475	30/51 (59%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	223..250		7/38 (18%)
		DUF4074	347..409	CDD:290032

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910