Protein Alignment ro and Hoxb6

DIOPT Version :10

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: NP_001385781.1
• Gene: Hoxb6 / 497986
• RGDID: 1562142
• Length: 224
• Species: Rattus norvegicus
• Alignment Length: 212
• Identity: 67/212 - (31%)
• Similarity: 80/212 - (37%)
• Gaps: 72/212 - (33%)

  Fly    69 HKPPPCDTPYHSDGGSVSSPDISISDERTSLAAY--PAYDFYGHAK--DYPQHPSQQHQQHHHHH 129
            |.|    .||....|         .|:..:.::|  ||...||.|.  ||...|:
  Rat    38 HYP----APYGPGPG---------QDKGFAASSYYPPAGGGYGRAAPCDYGPAPA---------- 79

  Fly   130 HHPPQLVHQKLSYVSPPPAIAAGGAANPVLPHAFPAGFPSD------------------PHF--- 173
                       .|.....|.|..||..|  |...|....||                  |.:
  Rat    80 -----------FYREKDAACALSGADEP--PPFHPEPRKSDCAQDKSVFGETEEQKCSTPVYPWM 131

  Fly   174 ----SAGFSAFLARRRRKEGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQ 234
                |...|:|....||  |||     |::..|||.||.|||.|.|::|.||.|:|..|.|||.|
  Rat   132 QRMNSCNSSSFGPSGRR--GRQ-----TYTRYQTLELEKEFHYNRYLTRRRRIEIAHALCLTERQ 189

  Fly   235 IKIWFQNRRAKDKRIEK 251
            |||||||||.|.|:..|
  Rat   190 IKIWFQNRRMKWKKESK 206

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeodomain	196..248	CDD:459649	31/51 (61%)
Hoxb6	NP_001385781.1	Homeodomain	147..203	CDD:459649	36/62 (58%)