Protein Alignment ro and Abd-B

DIOPT Version :9

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: NP_001303472.1
• Gene: Abd-B / 47763
• FlyBaseID: FBgn0000015
• Length: 493
• Species: Drosophila melanogaster
• Alignment Length: 180
• Identity: 57/180 - (31%)
• Similarity: 82/180 - (45%)
• Gaps: 37/180 - (20%)

  Fly    94 DERTSLAAYPAYDFYGHAKDYPQHPSQQHQQHHHHHHHPPQLVHQKLSYVSPPPAIAAGGAANPV 158
            |:.||.||..||     ..:..:|.|...:|         .:.....|...||...:.||.
  Fly   301 DQTTSAAAAAAY-----MNEAERHVSAAARQ---------SVEGTSTSSYEPPTYSSPGGL---- 347

  Fly   159 LPHAFPAGFPSDPHFSAGFSAFLA-------------RRRRKEGRQRRQRTTFSTEQTLRLEVEF 210
                  .|:||:.:.|:|.|..|:             .....:...|::|..:|..|||.||.||
  Fly   348 ------RGYPSENYSSSGASGGLSVGAVGPCTPNPGLHEWTGQVSVRKKRKPYSKFQTLELEKEF 406

  Fly   211 HRNEYISRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEKAQIDQHYRN 260
            ..|.|:|:.:|:|||..|:|||.|:||||||||.|:|:..:.|.:|...|
  Fly   407 LFNAYVSKQKRWELARNLQLTERQVKIWFQNRRMKNKKNSQRQANQQNNN 456

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeobox	196..247	CDD:278475	29/50 (58%)
Abd-B	NP_001303472.1	Homeobox	390..443	CDD:278475	30/52 (58%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439752
Domainoid	1	1.000	53	1.000	Domainoid score	I4196
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.930