Protein Alignment ro and hoxc8

DIOPT Version :9

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: NP_001006787.1
• Gene: hoxc8 / 448482
• XenbaseID: XB-GENE-480999
• Length: 242
• Species: Xenopus tropicalis
• Alignment Length: 221
• Identity: 58/221 - (26%)
• Similarity: 80/221 - (36%)
• Gaps: 66/221 - (29%)

  Fly    38 PSSPRQFFERLYGHLETRSSENGEIDVGTHAHKPPPCDTPYHSDGGSVSSPDISISDERTSLAAY 102
            ||:....|:....|:: ....:|...:.....:..||....|.|.......:           |.
 Frog    42 PSATAPGFQHPSHHVQ-EFFHHGSSSLSNSGFQQNPCALTCHGDASKFYGYE-----------AL 94

  Fly   103 PAYDFYGHAKD-----YPQHPSQQHQ-----QHHHHHHHPPQLVHQKLSYVSPPPAIAAGGAANP 157
            |....||..::     ||...|..:.     |.|.:.:..|.|:
 Frog    95 PRQSLYGAQQEASVVQYPDCKSSSNTNTSEGQGHLNQNSSPSLM--------------------- 138

  Fly   158 VLPHAFPAGFPSDPHFSAGFSAFLARRRRKEGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRF 222
                 ||...|..|             .|:.|||     |:|..|||.||.||..|.|::|.||.
 Frog   139 -----FPWMRPHAP-------------GRRSGRQ-----TYSRYQTLELEKEFLFNPYLTRKRRI 180

  Fly   223 ELAETLRLTETQIKIWFQNRRAKDKR 248
            |::..|.|||.|:||||||||.|.|:
 Frog   181 EVSHALGLTERQVKIWFQNRRMKWKK 206

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeobox	196..247	CDD:278475	29/50 (58%)
hoxc8	NP_001006787.1	Homeobox	153..206	CDD:365835	31/57 (54%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910