Protein Alignment ro and ems

DIOPT Version :10

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: NP_731868.1
• Gene: ems / 41697
• FlyBaseID: FBgn0000576
• Length: 494
• Species: Drosophila melanogaster
• Alignment Length: 371
• Identity: 86/371 - (23%)
• Similarity: 129/371 - (34%)
• Gaps: 143/371 - (38%)

  Fly     2 QRHKVEIGSPDGSPGIKRSDSLDPIANTTILSVPQRPSSPR------QFFERLYGH--------- 51
            |:|   :.:|...|.:  |.:...:.:..:|...|.|.:|:      :..:||:.:
  Fly   100 QQH---LQAPHPHPHL--SPAQQHVLHQHLLMQQQHPGTPKSHQDIQELLQRLHHNAAMASGLSP 159

  Fly    52 LETRSS---ENGEIDVGTHAHK---PPPCD---------TPYHSDGGSVSSPDISISDERTSLAA 101
            |:||.|   |..::.|.....:   ||..:         .|.|:...|||......|...|.|.:
  Fly   160 LQTRLSPETEQPQMAVSLKRERSPAPPAMEQAENPAQRIQPPHTPPKSVSPQSSQPSSSPTLLIS 224

  Fly   102 YPAYDFYGHAKDYPQHPSQQHQQHHHHHHHPPQLVHQKLS------------------------- 141
            .|      ||.     |.||.||....::..|.::|...:
  Fly   225 SP------HAT-----PPQQQQQQPPPNYPKPAMMHPGGAGPMMMPGMPPAGLVRPFPMGPGGPP 278

  Fly   142 ----------------YVSPPP--------------------AIAAGGAANPVLPHAFPAGFPSD 170
                            |::.||                    |:.||....|....|..||.|
  Fly   279 MPQGQPGLPDIKALPPYINAPPELPPQHNPHLIAAAQFQMAAALQAGHVLGPAAAAAAAAGLP-- 341

  Fly   171 PHFSAGF------------------------------SAFLARRRRKEGRQRRQRTTFSTEQTLR 205
            || :|.|                              .:||....||   .:|.||.||..|.|:
  Fly   342 PH-AAQFMPNPGMARDSYQLYPWLLSRHGRIFPHRFPGSFLVPPFRK---PKRIRTAFSPSQLLK 402

  Fly   206 LEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEK 251
            ||..|..|:|:..:.|..||:.|.|:|||:|:||||||.|.||:::
  Fly   403 LEHAFESNQYVVGAERKALAQNLNLSETQVKVWFQNRRTKHKRMQQ 448

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeodomain	196..248	CDD:459649	26/51 (51%)
ems	NP_731868.1	Homeodomain	389..445	CDD:459649	28/55 (51%)