Protein Alignment ro and Gsx2

DIOPT Version :9

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: NP_001131035.2
• Gene: Gsx2 / 364140
• RGDID: 1308047
• Length: 305
• Species: Rattus norvegicus
• Alignment Length: 278
• Identity: 78/278 - (28%)
• Similarity: 108/278 - (38%)
• Gaps: 80/278 - (28%)

  Fly    11 PDGSPGIKRSDSLDPIA--NTTILSVPQRPSSPRQFFERLYGHLETRSSENG-----EIDVGTHA 68
            |:..||   .|...|:.  :..::|| ..|..|              |.::|     .:.|.:|.
  Rat    23 PESHPG---PDFFIPLGMPSPLVMSV-SGPGCP--------------SRKSGAFCVCPLCVTSHL 69

  Fly    69 HKPPPCDTPYHSDGGSVSSPDISISDE------------RTSLAAYPAYDFYGHAKDYPQHPSQQ 121
            |...|   |..:.||:..:...:::..            ::..:..|     |.|:..|:.....
  Rat    70 HSSRP---PAGAGGGATGTAGAAVAGGGVAGGTGALPLLKSQFSPGP-----GDAQFCPRVSHAH 126

  Fly   122 HQQH---HHHHHHPPQLVHQKLSYVSPPPAIAAGGAANPVLPHAFPAGFP--------------S 169
            |..|   ||||||.||         .|..|.||..||......|...|.|              |
  Rat   127 HHHHAPQHHHHHHQPQ---------QPGSAAAAAAAAAAAAAAAAALGHPQHHAPVCAATTYNVS 182

  Fly   170 DPH----FSAGFSAFLARRRRKEGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRL 230
            ||.    .:.|.|     ...:....:|.||.|::.|.|.||.||..|.|:||.||.|:|..|.|
  Rat   183 DPRRFHCLTMGGS-----DTSQVPNGKRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLNL 242

  Fly   231 TETQIKIWFQNRRAKDKR 248
            :|.|:||||||||.|.|:
  Rat   243 SEKQVKIWFQNRRVKHKK 260

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeobox	196..247	CDD:278475	29/50 (58%)
Gsx2	NP_001131035.2	Homeobox	207..260	CDD:395001	30/52 (58%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.900