DRSC/TRiP Functional Genomics Resources

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Protein Alignment ro and HOXA2

DIOPT Version :10

Sequence 1:NP_524521.1 Gene:ro / 43234 FlyBaseID:FBgn0003267 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_006726.1 Gene:HOXA2 / 3199 HGNCID:5103 Length:376 Species:Homo sapiens


Alignment Length:344 Identity:80/344 - (23%)
Similarity:120/344 - (34%) Gaps:111/344 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 FERLYGHLETRSS---------------ENGEIDVGTHAHK---PPPCDT----------PYHSD 81
            |||..|.:.::.|               ::..|...|.:|.   |||.:.          |.|..
Human     5 FEREIGFINSQPSLAECLTSFPPVADTFQSSSIKTSTLSHSTLIPPPFEQTIPSLNPGSHPRHGA 69

  Fly    82 GGSVSSPDISISDERTSLAAYPAYDFYGHAKDYPQHPSQQHQQHHHHHHHPPQLVHQKLSYVSPP 146
            ||   .|..|.:..|.|  ..||     .|...|::|..:.::           ..:|.:.:...
Human    70 GG---RPKPSPAGSRGS--PVPA-----GALQPPEYPWMKEKK-----------AAKKTALLPAA 113

  Fly   147 PAIAAGGAANPVLPHAFPAGFPSDPHFSAGFSAFLARRRRKE------GRQRRQRTTFSTEQTLR 205
            .|.|...|..|                     |.|:.:...|      |..||.||.::..|.|.
Human   114 AAAATAAATGP---------------------ACLSHKESLEIADGSGGGSRRLRTAYTNTQLLE 157

  Fly   206 LEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNRRAKDKR-------------------IEK 251
            ||.|||.|:|:.|.||.|:|..|.|||.|:|:||||||.|.||                   .||
Human   158 LEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKENQNSEGKCKSLEDSEK 222

  Fly   252 AQIDQHYRNFVVANGFMSSIMGQAATTMPPGGVTGGVAVGVGLNYYAAAATPAALPKDNTQDANF 316
            .:.|:..:          ::..||.:      |:|.:....|..:...|.:....|..:..|:..
Human   223 VEEDEEEK----------TLFEQALS------VSGALLEREGYTFQQNALSQQQAPNGHNGDSQS 271

  Fly   317 IDIDDQFQRQQQQKQQQQQ 335
            ..:......::..|..|.|
Human   272 FPVSPLTSNEKNLKHFQHQ 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
roNP_524521.1 Homeodomain 196..248 CDD:459649 28/51 (55%)
HOXA2NP_006726.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..93 15/60 (25%)
Antp-type hexapeptide 94..99 1/4 (25%)
Homeodomain 144..200 CDD:459649 31/55 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..229 5/30 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..279 2/21 (10%)

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