DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ro and HOXA2

DIOPT Version :9

Sequence 1:NP_524521.1 Gene:ro / 43234 FlyBaseID:FBgn0003267 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_006726.1 Gene:HOXA2 / 3199 HGNCID:5103 Length:376 Species:Homo sapiens


Alignment Length:344 Identity:80/344 - (23%)
Similarity:120/344 - (34%) Gaps:111/344 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 FERLYGHLETRSS---------------ENGEIDVGTHAHK---PPPCDT----------PYHSD 81
            |||..|.:.::.|               ::..|...|.:|.   |||.:.          |.|..
Human     5 FEREIGFINSQPSLAECLTSFPPVADTFQSSSIKTSTLSHSTLIPPPFEQTIPSLNPGSHPRHGA 69

  Fly    82 GGSVSSPDISISDERTSLAAYPAYDFYGHAKDYPQHPSQQHQQHHHHHHHPPQLVHQKLSYVSPP 146
            ||   .|..|.:..|.|  ..||     .|...|::|..:.::           ..:|.:.:...
Human    70 GG---RPKPSPAGSRGS--PVPA-----GALQPPEYPWMKEKK-----------AAKKTALLPAA 113

  Fly   147 PAIAAGGAANPVLPHAFPAGFPSDPHFSAGFSAFLARRRRKE------GRQRRQRTTFSTEQTLR 205
            .|.|...|..|                     |.|:.:...|      |..||.||.::..|.|.
Human   114 AAAATAAATGP---------------------ACLSHKESLEIADGSGGGSRRLRTAYTNTQLLE 157

  Fly   206 LEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNRRAKDKR-------------------IEK 251
            ||.|||.|:|:.|.||.|:|..|.|||.|:|:||||||.|.||                   .||
Human   158 LEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKRQTQCKENQNSEGKCKSLEDSEK 222

  Fly   252 AQIDQHYRNFVVANGFMSSIMGQAATTMPPGGVTGGVAVGVGLNYYAAAATPAALPKDNTQDANF 316
            .:.|:..:          ::..||.:      |:|.:....|..:...|.:....|..:..|:..
Human   223 VEEDEEEK----------TLFEQALS------VSGALLEREGYTFQQNALSQQQAPNGHNGDSQS 271

  Fly   317 IDIDDQFQRQQQQKQQQQQ 335
            ..:......::..|..|.|
Human   272 FPVSPLTSNEKNLKHFQHQ 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
roNP_524521.1 Homeobox 196..247 CDD:278475 28/50 (56%)
HOXA2NP_006726.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 42..93 15/60 (25%)
Antp-type hexapeptide 94..99 1/4 (25%)
Homeobox 147..200 CDD:395001 29/52 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 198..229 5/30 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..279 2/21 (10%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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