Protein Alignment ro and hoxc3a

DIOPT Version :9

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: NP_001128157.2
• Gene: hoxc3a / 30421
• ZFINID: ZDB-GENE-980526-532
• Length: 263
• Species: Danio rerio
• Alignment Length: 129
• Identity: 47/129 - (36%)
• Similarity: 64/129 - (49%)
• Gaps: 18/129 - (13%)

  Fly   161 HAFPAGFPS-------DPHFSAGFSAFLARRRRKEGRQRRQRTTFSTEQTLRLEVEFHRNEYISR 218
            || |..|.|       |..:|.|.:..      :....:|.|..|::.|.|.||.|||.:.|:.|
Zfish   128 HA-PTHFSSINAMESGDSKYSNGEAVV------RNSSSKRARVAFTSSQLLELEKEFHFSAYLCR 185

  Fly   219 SRRFELAETLRLTETQIKIWFQNRRAKDKR--IEKAQIDQHYRNFVVANGFMSSIMGQAATTMP 280
            :||.|:||.|:||:.||||||||||.|.|:  .||:.....|......|  ...|:.::.|..|
Zfish   186 NRRLEMAELLKLTDRQIKIWFQNRRMKYKKDHKEKSTAKSSYTYLGTEN--QPLIISRSTTDSP 247

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeobox	196..247	CDD:278475	29/50 (58%)
hoxc3a	NP_001128157.2	Abdominal-A	123..246	CDD:332641	46/126 (37%)
		Homeobox	162..214	CDD:306543	30/51 (59%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.900