Protein Alignment ro and hoxd9a

DIOPT Version :9

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: NP_571201.3
• Gene: hoxd9a / 30350
• ZFINID: ZDB-GENE-990415-121
• Length: 262
• Species: Danio rerio
• Alignment Length: 255
• Identity: 69/255 - (27%)
• Similarity: 95/255 - (37%)
• Gaps: 57/255 - (22%)

  Fly    44 FFERLYGHLETRSSENGEIDVGTHAHKPPPCDTPYHSDGGSVSSPDISISDERTSLAAYPAYDFY 108
            :.:.:.|| |...........|:|.....|        .|.|.:.|.|........|.:||....
Zfish    11 YVDTIMGH-EAEDVYGARYIQGSHTAPARP--------SGVVENADFSSCSFAPKSAVFPASWSS 66

  Fly   109 GH-----AKDYPQHPSQQHQQHHHHHHHPPQLVHQKLSYVSPP---PAIAAGGAANPVLP----- 160
            .|     |.....|| ..||.|...:.:....:....:::|..   |.....|.....||
Zfish    67 VHQPSTAAVSGIYHP-YVHQTHLSDNRYVRSWIEPVANHISLTGFHPNSRHSGTKTESLPPKRTE 130

  Fly   161 -HAFPAGFPSDPHFS---AGFSAFLARRRR-----------KEGRQ------------------- 191
             .||....||.|.||   ...||..|...|           |:.:|
Zfish   131 SAAFETETPSVPEFSLNAVSESADKATEERVGSDNSSHGEPKDEKQQQQLDPSNPAANWIHARST 195

  Fly   192 RRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEK 251
            |::|..::..|||.||.||..|.|::|.||:|:|..|.|||.|:||||||||.|.|::.:
Zfish   196 RKKRCPYTKYQTLELEKEFLYNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKMNR 255

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeobox	196..247	CDD:278475	28/50 (56%)
hoxd9a	NP_571201.3	Hox9_act	1..182	CDD:282473	38/180 (21%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	107..187		17/79 (22%)
		Homeobox	198..251	CDD:278475	29/52 (56%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	1.000