Protein Alignment ro and hoxc4a

DIOPT Version :9

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: NP_571197.1
• Gene: hoxc4a / 30345
• ZFINID: ZDB-GENE-990415-112
• Length: 268
• Species: Danio rerio
• Alignment Length: 300
• Identity: 77/300 - (25%)
• Similarity: 102/300 - (34%)
• Gaps: 116/300 - (38%)

  Fly    70 KPPPCD-------TPYHSDGGSVSSPDISISDERTSLAAYPAYDFYGHAKDYPQHPSQQHQQHHH 127
            |.|||:       .|.||.                        ::|..|:|       ...||||
Zfish    16 KFPPCEEYSQNSYIPEHSP------------------------EYYSRARD-------SGYQHHH 49

  Fly   128 HHHHPPQLVHQKLSY------------------------------VSPPP-------AIAAGGAA 155
            ...:||:..:|:..|                              ..|||       ..||..|.
Zfish    50 QELYPPRASYQERQYNCASIPEPDTQRGHGLPHAGHLLGKGQSASCEPPPLPLSPATPSAASSAC 114

  Fly   156 NPVLP-HAFPAGFPSDP---------HFSAGFSAFLARRRRKEGRQRRQRTTFSTEQTLRLEVEF 210
            |...| |...:.....|         |.|...|::      .....:|.||.::.:|.|.||.||
Zfish   115 NQATPEHPNSSASAKQPVVYPWMKKIHVSTVNSSY------NGAEPKRSRTAYTRQQVLELEKEF 173

  Fly   211 HRNEYISRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEKAQIDQHYRNFVVANGFMSSIMGQA 275
            |.|.|::|.||.|:|.:|.|:|.||||||||||.|.|:      |....|
Zfish   174 HYNRYLTRRRRIEIAHSLVLSERQIKIWFQNRRMKWKK------DHRLPN--------------- 217

  Fly   276 ATTMPPGGVTGGVAVGVGLNYYAAAATPAALPKDNTQDAN 315
             |.:.....||   :..|.|..:||...||....||..|:
Zfish   218 -TKVRSSSSTG---ISSGSNTSSAAGVVAAASTTNTMSAS 253

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeobox	196..247	CDD:278475	29/50 (58%)
hoxc4a	NP_571197.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	70..129		9/58 (16%)
		Antp-type hexapeptide	133..138		0/4 (0%)
		Homeobox	157..210	CDD:278475	30/52 (58%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	212..268		14/60 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.900