Protein Alignment ro and hoxb4a

DIOPT Version :10

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: NP_571193.1
• Gene: hoxb4a / 30340
• ZFINID: ZDB-GENE-990415-105
• Length: 246
• Species: Danio rerio
• Alignment Length: 248
• Identity: 73/248 - (29%)
• Similarity: 98/248 - (39%)
• Gaps: 56/248 - (22%)

  Fly    70 KPPPCDTPYHSDGGSVSSPDISISDERTSLAAYPAYDFYGHAKDYPQHPSQQHQQHHHHHH---H 131
            |.|||:....||.....||                 |:|...:   |.||.||:..:|...   .
Zfish    16 KFPPCEEYSQSDYLPSHSP-----------------DYYSAQR---QDPSFQHESIYHQRSGCAD 60

  Fly   132 PP----QLVHQKLSYVSPPPAIAAGGAANPVLP---HAFPAGFPSDP------HFSAGFSAFLAR 183
            ||    |...|..:.:||...:....|.:..||   |...:..||.|      ..|...|...:|
Zfish    61 PPYSSCQGPGQPAAVISPRGHVLPTTALSTPLPEPSHHCDSVTPSPPPACGQTPTSQNTSTVSSR 125

  Fly   184 R------------------RRKEGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRL 230
            :                  ....|..:|.||.::.:|.|.||.|||.|.|::|.||.|:|.||.|
Zfish   126 KDPVVYPWMKKVHVNIVSPNYSGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHTLCL 190

  Fly   231 TETQIKIWFQNRRAKDKRIEKAQIDQHYRNFVVAN--GFMSSIMGQAATTMPP 281
            :|.||||||||||.|.|:..|....:...|....|  |..:....|:..:.||
Zfish   191 SERQIKIWFQNRRMKWKKDHKLPNTKIRSNSASTNSSGCPTLCSNQSRASGPP 243

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeodomain	196..248	CDD:459649	30/51 (59%)
hoxb4a	NP_571193.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	23..125		27/121 (22%)
		Antp-type hexapeptide	130..135		0/4 (0%)
		Homeodomain	152..208	CDD:459649	32/55 (58%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	210..246		7/34 (21%)