Protein Alignment ro and hoxb5a

DIOPT Version :10

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: NP_571176.2
• Gene: hoxb5a / 30317
• ZFINID: ZDB-GENE-980526-70
• Length: 275
• Species: Danio rerio
• Alignment Length: 208
• Identity: 62/208 - (29%)
• Similarity: 92/208 - (44%)
• Gaps: 38/208 - (18%)

  Fly    53 ETRSSENGEIDVGTHAHKPPPCDTPYHSDGGSVSSPDISISDERTSLAAYPAYDFYGHAKDYPQH 117
            |||..:.....:.  :.:|.||... .|.|...|||.   ||:.|:.|        |:..:...|
Zfish    82 ETRFRQPSSCSLA--SPEPLPCSNS-ESLGPKGSSPP---SDQSTTTA--------GNNLNSNTH 132

  Fly   118 ---------PSQQHQQHHHHHHHPPQLVHQKLSYVSPPPAIAAGGAANPVLPHAFPAGFPSDPHF 173
                     .|:..:..|..::..|:...::.:..:...:..:.|.|    |..||  :....|.
Zfish   133 FTEIDEASASSETEEASHRANNSAPRTQQKQETTATSTTSATSDGQA----PQIFP--WMRKLHI 191

  Fly   174 SAGFSAFLARRRRKEGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIW 238
            |...:.       .:|  :|.||.::..|||.||.|||.|.|::|.||.|:|..|.|:|.|||||
Zfish   192 SHDMTG-------PDG--KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIW 247

  Fly   239 FQNRRAKDKRIEK 251
            |||||.|.|:..|
Zfish   248 FQNRRMKWKKDNK 260

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeodomain	196..248	CDD:459649	30/51 (59%)
hoxb5a	NP_571176.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	70..181		22/116 (19%)
		Antp-type hexapeptide	182..187		2/6 (33%)
		Homeodomain	201..257	CDD:459649	32/55 (58%)