Protein Alignment ro and Gsx1

DIOPT Version :9

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: NP_001178592.1
• Gene: Gsx1 / 288457
• RGDID: 1310020
• Length: 261
• Species: Rattus norvegicus
• Alignment Length: 300
• Identity: 82/300 - (27%)
• Similarity: 113/300 - (37%)
• Gaps: 77/300 - (25%)

  Fly    41 PRQFFERLYGHLETRSSENGEIDVGTHAHKPPPCDTPY-----HSDGGSVSSPDISISDERTSLA 100
            ||.|   |...|..|.:.:.:...|:    |||. .||     |:..|  .||....:.:...|.
  Rat     2 PRSF---LVDSLVLREASDKKAPEGS----PPPL-FPYAVPPPHALHG--LSPGACHARKAGLLC 56

  Fly   101 AYP----AYDFYGH---------AKDYPQHPSQQ-HQQHHHHHHHPPQLVHQKLSYVSPPPAIAA 151
            ..|    |...:|.         ...:|...||. |......|...|.:.|.        ||.||
  Rat    57 VCPLCVTASQLHGPPGPPALPLLKASFPPFGSQYCHAPLGRQHSVSPGVAHS--------PAAAA 113

  Fly   152 GGAANPVLPHAFPAGFPSDPH-FSAGFSAFLARRRRKEGRQRRQRTTFSTEQTLRLEVEFHRNEY 215
            ..||  :...::|...|...| .|...|:      .:....:|.||.|::.|.|.||.||..|.|
  Rat   114 AAAA--LYQTSYPLPDPRQFHCISVDSSS------NQLPSSKRMRTAFTSTQLLELEREFASNMY 170

  Fly   216 ISRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEKAQIDQHYRNFVVANGFMSSIMGQAATTMP 280
            :||.||.|:|..|.|:|.|:||||||||.|.|:                .|..|:..|.|.
  Rat   171 LSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKK----------------EGKGSNHRGGAG---- 215

  Fly   281 PGGVTGGVAVGVGLNYYAAA----------ATPAALPKDN 310
             .|..||...|...:..::|          .:|::..||:
  Rat   216 -AGAGGGAPQGCKCSSLSSAKCSEDDDELPMSPSSSGKDD 254

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeobox	196..247	CDD:278475	29/50 (58%)
Gsx1	NP_001178592.1	Homeobox	150..202	CDD:278475	30/51 (59%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.900