Protein Alignment ro and ind

DIOPT Version :9

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Alignment Length: 335
• Identity: 81/335 - (24%)
• Similarity: 105/335 - (31%)
• Gaps: 154/335 - (45%)

  Fly     1 MQRHKVEIGSPDGSPGIKRSDSLDPIANTTILSVPQRPSSPRQFFERLYGHLETRSSENGEIDVG 65
            :.:.|.::|||.||          |.|...:.:....||.|...:...|              ||
  Fly    17 LSQKKEKLGSPGGS----------PTAAAAVAAAAMLPSIPMLPYPASY--------------VG 57

  Fly    66 THAHKPPPCDTPYHSDGGSVSSPDISISDERTSLAAYPAYDFYGHAKDYPQHPSQQH-------- 122
            ::..                   .:.|..::..                 |...|||
  Fly    58 SYLF-------------------SLGIQQQQQQ-----------------QQQQQQHAAAAAAAA 86

  Fly   123 ------QQHHHHHHHPPQLVH---------QKLS--------YVSPP----------PAI----- 149
                  |||.|....|..|.|         :|.|        |.|||          |.|
  Fly    87 AAAAALQQHPHVSSSPGSLYHPYAQLFASKRKSSGFSNYEGCYPSPPLSANPNSQQLPPIHNLYG 151

  Fly   150 --AAGGAANPVLPHAFPAGFPSDPHFSAGFSAFL----------ARRRRKEG------------- 189
              ..||     ||...|..|.:.|  ||..||.|          .:|.:.|.
  Fly   152 SPVVGG-----LPLPEPGSFCTSP--SASSSASLDYTNNFDEPQGKRFKHESSCSPNSSPLKNHS 209

  Fly   190 ----------------RQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIW 238
                            ..:|.||.|::.|.|.||.||..|.|:||.||.|:|..|||:|.|:|||
  Fly   210 SGGPVEITPLINDYADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANRLRLSEKQVKIW 274

  Fly   239 FQNRRAKDKR 248
            |||||.|.|:
  Fly   275 FQNRRVKQKK 284

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeobox	196..247	CDD:278475	30/50 (60%)
ind	NP_996087.2	Homeobox	231..283	CDD:278475	31/51 (61%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439763
Domainoid	1	1.000	53	1.000	Domainoid score	I4196
eggNOG	1	0.900	-	-		E2759_KOG0489
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.740