DRSC/TRiP Functional Genomics Resources

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Protein Alignment ro and GBX1

DIOPT Version :10

Sequence 1:NP_524521.1 Gene:ro / 43234 FlyBaseID:FBgn0003267 Length:350 Species:Drosophila melanogaster
Sequence 2:NP_001092304.1 Gene:GBX1 / 2636 HGNCID:4185 Length:363 Species:Homo sapiens


Alignment Length:197 Identity:58/197 - (29%)
Similarity:86/197 - (43%) Gaps:46/197 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 KPPPCDTPYHSD-------GGSVSSPDISISDERTSLAAYPAYDFYGHAKDYPQHPSQQHQQHHH 127
            :|||...|:.|:       .|.|.|.|   .::..:.|..||             .|:|.::...
Human   162 EPPPPPPPHFSETFPSLPAEGKVYSSD---EEKLEASAGDPA-------------GSEQEEEGSG 210

  Fly   128 HHHHPPQLVHQKLSYVSPPPAIAAGG-----AANPVLPHAFPAGFPSDPHFSAGFSAFLARRRRK 187
            ........:..           :|||     ...|.|..:...|.......:||.:|       .
Human   211 GDSEDDGFLDS-----------SAGGPGALLGPKPKLKGSLGTGAEEGAPVTAGVTA-------P 257

  Fly   188 EGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEKA 252
            .|:.||:||.|::||.|.||.|||..:|:|.:.|.::|..|:|:|.|:||||||||||.|||:..
Human   258 GGKSRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRIKAG 322

  Fly   253 QI 254
            .:
Human   323 NV 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
roNP_524521.1 Homeodomain 196..248 CDD:459649 28/51 (55%)
GBX1NP_001092304.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 128..265 26/136 (19%)
Homeodomain 262..318 CDD:459649 31/55 (56%)
Blue background indicates that the domain is not in the aligned region.

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