Sequence 1: | NP_524521.1 | Gene: | ro / 43234 | FlyBaseID: | FBgn0003267 | Length: | 350 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001103354.1 | Gene: | Hoxc4 / 24459 | RGDID: | 1586210 | Length: | 264 | Species: | Rattus norvegicus |
Alignment Length: | 327 | Identity: | 82/327 - (25%) |
---|---|---|---|
Similarity: | 111/327 - (33%) | Gaps: | 132/327 - (40%) |
- Green bases have known domain annotations that are detailed below.
Fly 70 KPPPCD-------TPYHSDGGSVSSPDISISDERTSLAAYPAYDFYG----------HAKDYPQH 117
Fly 118 P--------------------SQQHQQHHHHHHHPPQLVHQKLSYVSPP---PAIAAGGAANP-V 158
Fly 159 LPHAFPAGFPSDPHFSAGFSAFLARRRRK-----------EGRQRRQRTTFSTEQTLRLEVEFHR 212
Fly 213 NEYISRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEKAQIDQHYRNFVVANGFMSSIMGQAAT 277
Fly 278 TMPPGGVTGGVAVGVGLNYYAAAATPAALPKDNTQDANFIDIDDQFQRQQQQKQQQQQQQQRRRE 342
Fly 343 TT 344 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ro | NP_524521.1 | Homeobox | 196..247 | CDD:278475 | 29/50 (58%) |
Hoxc4 | NP_001103354.1 | Homeobox | 159..213 | CDD:395001 | 30/53 (57%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0489 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000007 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.900 |