Protein Alignment ro and Hoxb8

DIOPT Version :9

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: NP_001178578.1
• Gene: Hoxb8 / 24457
• RGDID: 1586211
• Length: 243
• Species: Rattus norvegicus
• Alignment Length: 216
• Identity: 66/216 - (30%)
• Similarity: 86/216 - (39%)
• Gaps: 64/216 - (29%)

  Fly    36 QRPSSPRQFFERLYGHLETRSSENGEIDVGTHAHKPPPCDTPYHSDGGSVSSPDISISDERTSLA 100
            |.||..::|:             :|...:.|..::..||....|.|.|
  Rat    49 QHPSQIQEFY-------------HGPSSLSTAPYQQNPCAVACHGDPG----------------- 83

  Fly   101 AYPAYDFYGHAKDYPQHPSQQHQQHHHHHHHPPQLVHQ---KLSYVSPPPAIAAGGAANPVLPHA 162
                 :|||:  |..|..|....|       .|.||..   ||:..|.....|.|...:|.....
  Rat    84 -----NFYGY--DPLQRQSLFGAQ-------DPDLVQYADCKLAAASGLGEEAEGSEQSPSPTQL 134

  Fly   163 FPAGFPSDPHFSAGFSAFLARRRRKEGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAET 227
            ||.   ..|..:||         |:.|||     |:|..|||.||.||..|.|::|.||.|::..
  Rat   135 FPW---MRPQAAAG---------RRRGRQ-----TYSRYQTLELEKEFLFNPYLTRKRRIEVSHA 182

  Fly   228 LRLTETQIKIWFQNRRAKDKR 248
            |.|||.|:||||||||.|.|:
  Rat   183 LGLTERQVKIWFQNRRMKWKK 203

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeobox	196..247	CDD:278475	29/50 (58%)
Hoxb8	NP_001178578.1	Homeobox	150..203	CDD:395001	31/57 (54%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.900