Protein Alignment ro and Hoxc9

DIOPT Version :9

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: NP_032298.1
• Gene: Hoxc9 / 15427
• MGIID: 96199
• Length: 260
• Species: Mus musculus
• Alignment Length: 273
• Identity: 73/273 - (26%)
• Similarity: 101/273 - (36%)
• Gaps: 81/273 - (29%)

  Fly    15 PGIKRSDSLDPIANTTILSVPQRPSSPR-QFFERLYGHLETRSSENGEIDVGTHAHKPPP---CD 75
            |...|...|.|..:    ..|....:|: ..|...:..:.::||      |..|.:.|.|   .|
Mouse    35 PAAARPSGLVPDCS----DFPSCSFAPKPAVFSTSWAPVPSQSS------VVYHPYGPQPHLGAD 89

  Fly    76 TPYHSD-----GGSVSSPDISISDERTSLA--AYP---AYDFYGHAKDYPQHPSQQHQQHHHHHH 130
            |.|...     .|:||.|.........:|.  |||   |....|..:.||.:
Mouse    90 TRYMRTWLEPLSGAVSFPSFPAGGRHYALKPDAYPGRRADCGPGDGRSYPDY------------- 141

  Fly   131 HPPQLVHQKLSYVSPPPAIAAGGAANPVLPHAFPAGFPSDPHFSAGFSAFLARRRRKEGR----- 190
                      .|.||       |......|...|:     |...|     ||..:.||.:
Mouse   142 ----------MYGSP-------GELRDRAPQTLPS-----PEADA-----LAGSKHKEEKADLDP 179

  Fly   191 ------------QRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNRR 243
                        .|::|..::..|||.||.||..|.|::|.||:|:|..|.|||.|:||||||||
Mouse   180 SNPVANWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARVLNLTERQVKIWFQNRR 244

  Fly   244 AKDKRIEKAQIDQ 256
            .|.|::.|.:.|:
Mouse   245 MKMKKMNKEKTDK 257

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeobox	196..247	CDD:278475	28/50 (56%)
Hoxc9	NP_032298.1	Hox9_act	1..179	CDD:398350	40/193 (21%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	120..182		19/101 (19%)
		HOX	192..241	CDD:197696	24/48 (50%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	2.000