Protein Alignment ro and Hoxc6

DIOPT Version :9

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: XP_006520531.1
• Gene: Hoxc6 / 15425
• MGIID: 96197
• Length: 243
• Species: Mus musculus
• Alignment Length: 266
• Identity: 69/266 - (25%)
• Similarity: 92/266 - (34%)
• Gaps: 101/266 - (37%)

  Fly     9 GSPDGSPGIK-RSDSLDP----------IANTTILSVPQRPSSPRQFFERLYGHLETRSSENGEI 62
            |..|..|.:. .|.:.||          :|...|.|.|.........|          ||..|..
Mouse    16 GGQDVLPNVALNSTAYDPVRHFSTYGAAVAQNRIYSTPFYSPQENVVF----------SSSRGPY 70

  Fly    63 DVGTHAHKPPP-----C--DTPYHSDGGSVSSPDISISDERTSLAAYPAYDFYGHAKDYPQ---- 116
            |.|:::.....     |  :|..|:...|::. |.|....||:                ||
Mouse    71 DYGSNSFYQEKDMLSNCRQNTLGHNTQTSIAQ-DFSSEQGRTA----------------PQDQKA 118

  Fly   117 ----HPSQQHQQHHHHHHHPPQLVHQKLSYVSPPPAIAAGGAANPVLPHAFPAGFPSDPHFSAGF 177
                :|..|....|            .:.:|                |.:...|:.:|
Mouse   119 SIQIYPWMQRMNSH------------SVCFV----------------PGSLGVGYGAD------- 148

  Fly   178 SAFLARRRRKEGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNR 242
                    |:.|||     .:|..|||.||.|||.|.|::|.||.|:|..|.|||.|||||||||
Mouse   149 --------RRRGRQ-----IYSRYQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNR 200

  Fly   243 RAKDKR 248
            |.|.|:
Mouse   201 RMKWKK 206

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeobox	196..247	CDD:278475	31/50 (62%)
Hoxc6	XP_006520531.1	Homeobox	153..206	CDD:395001	33/57 (58%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.900