Protein Alignment ro and Hoxb6

DIOPT Version :10

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: XP_006532355.1
• Gene: Hoxb6 / 15414
• MGIID: 96187
• Length: 309
• Species: Mus musculus
• Alignment Length: 295
• Identity: 87/295 - (29%)
• Similarity: 104/295 - (35%)
• Gaps: 94/295 - (31%)

  Fly     4 HKVEIG---SPDGSPGIKRSD-SLDPIANTTILSVPQRPSSPRQFF--------------ERLYG 50
            |..|.|   :|..|...:||| ....|.|......|:.|..|...:              |...|
Mouse    44 HPFESGGGQNPPSSAKARRSDYKTQQIINPAEQQRPRAPPLPMSSYFVNSTFPVTLASGQESFLG 108

  Fly    51 HLETRSSENGEIDVGTHAHKPPPCDTPYHSDGGSVSSPDISISDERTSLAAY--PAYDFYGHAK- 112
            .|...||  |..|  ...|.|    .||....|         .|:..:.::|  ||...||.|.
Mouse   109 QLPLYSS--GYAD--PLRHYP----APYGPGPG---------QDKGFAASSYYPPAGGGYGRAAP 156

  Fly   113 -DYPQHPSQQHQQHHHHHHHPPQLVHQKLSYVSPPPAIAAGGAANPVLPHAFPAGFPSD------ 170
             ||...|:                     .|.....|.|..||..|  |...|....||
Mouse   157 CDYGPAPA---------------------FYREKDAACALSGADEP--PPFHPEPRKSDCAQDKS 198

  Fly   171 ------------PHF-------SAGFSAFLARRRRKEGRQRRQRTTFSTEQTLRLEVEFHRNEYI 216
                        |.:       |...|:|....||  |||     |::..|||.||.|||.|.|:
Mouse   199 VFGETEEQKCSTPVYPWMQRMNSCNSSSFGPSGRR--GRQ-----TYTRYQTLELEKEFHYNRYL 256

  Fly   217 SRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEK 251
            :|.||.|:|..|.|||.||||||||||.|.|:..|
Mouse   257 TRRRRIEIAHALCLTERQIKIWFQNRRMKWKKESK 291

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeodomain	196..248	CDD:459649	31/51 (61%)
Hoxb6	XP_006532355.1	Homeodomain	232..288	CDD:459649	36/62 (58%)