Protein Alignment ro and Hoxb1

DIOPT Version :10

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: XP_006532343.1
• Gene: Hoxb1 / 15407
• MGIID: 96182
• Length: 330
• Species: Mus musculus
• Alignment Length: 271
• Identity: 71/271 - (26%)
• Similarity: 96/271 - (35%)
• Gaps: 98/271 - (36%)

  Fly    72 PPCDTP----YHSD---GGSVSSPDIS------ISDERTSLAA---YPAYDFYGHAKDYPQH-PS 119
            |||..|    |..:   ||.:.|..:.      :....:||..   .||...|..|...|.: ||
Mouse    29 PPCSAPAVDSYAGESRYGGGLPSSALQQNSGYPVQQPPSSLGVSFPSPAPSGYAPAACNPSYGPS 93

  Fly   120 QQH----QQHHHHHHHPPQLVHQKLSYVSP----PPAIAAGG-AANPVLPHAFPAGFPSDPHFSA 175
            |.:    .:....:.||.       ||.:.    |.:..||| .:.|..|...|.|......|::
Mouse    94 QYYSVGQSEGDGSYFHPS-------SYGAQLGGLPDSYGAGGVGSGPYPPPQPPYGTEQTATFAS 151

  Fly   176 GFSAF------------------------LARRRRKEGRQRRQ---------------------- 194
            .:...                        :.|...|.||.:|.
Mouse   152 AYDLLSEDKESPCSSEPSTLTPRTFDWMKVKRNPPKTGRAQRSHFLSLARAYTEGPEPGLHSFLQ 216

  Fly   195 -------------------RTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQ 240
                               ||.|:|.|...||.|||.|:|:||:||.|:|.||.|.|||:|||||
Mouse   217 LLLLAAKVSELGLGAPGGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQ 281

  Fly   241 NRRAKDKRIEK 251
            |||.|.|:.|:
Mouse   282 NRRMKQKKRER 292

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeodomain	196..248	CDD:459649	32/51 (63%)
Hoxb1	XP_006532343.1	Homeodomain	236..289	CDD:459649	33/52 (63%)