Protein Alignment ro and Gsx1

DIOPT Version :9

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: NP_032204.1
• Gene: Gsx1 / 14842
• MGIID: 95842
• Length: 261
• Species: Mus musculus
• Alignment Length: 300
• Identity: 82/300 - (27%)
• Similarity: 113/300 - (37%)
• Gaps: 77/300 - (25%)

  Fly    41 PRQFFERLYGHLETRSSENGEIDVGTHAHKPPPCDTPY-----HSDGGSVSSPDISISDERTSLA 100
            ||.|   |...|..|.:.:.:...|:    |||. .||     |:..|  .||....:.:...|.
Mouse     2 PRSF---LVDSLVLREASDKKAPEGS----PPPL-FPYAVPPPHALHG--LSPGACHARKAGLLC 56

  Fly   101 AYP----AYDFYGH---------AKDYPQHPSQQ-HQQHHHHHHHPPQLVHQKLSYVSPPPAIAA 151
            ..|    |...:|.         ...:|...||. |......|...|.:.|        .||.||
Mouse    57 VCPLCVTASQLHGPPGPPALPLLKASFPPFGSQYCHAPLGRQHSVSPGVAH--------GPAAAA 113

  Fly   152 GGAANPVLPHAFPAGFPSDPH-FSAGFSAFLARRRRKEGRQRRQRTTFSTEQTLRLEVEFHRNEY 215
            ..||  :...::|...|...| .|...|:      .:....:|.||.|::.|.|.||.||..|.|
Mouse   114 AAAA--LYQTSYPLPDPRQFHCISVDSSS------NQLPSSKRMRTAFTSTQLLELEREFASNMY 170

  Fly   216 ISRSRRFELAETLRLTETQIKIWFQNRRAKDKRIEKAQIDQHYRNFVVANGFMSSIMGQAATTMP 280
            :||.||.|:|..|.|:|.|:||||||||.|.|:                .|..|:..|.|.
Mouse   171 LSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKK----------------EGKGSNHRGGAG---- 215

  Fly   281 PGGVTGGVAVGVGLNYYAAA----------ATPAALPKDN 310
             .|..||...|...:..::|          .:|::..||:
Mouse   216 -AGAGGGAPQGCKCSSLSSAKCSEDDDELPMSPSSSGKDD 254

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeobox	196..247	CDD:278475	29/50 (58%)
Gsx1	NP_032204.1	SNAG domain. /evidence=ECO:0000250	1..20		6/20 (30%)
		Homeobox	150..203	CDD:395001	30/52 (58%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	201..261		13/74 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900