DRSC/TRiP Functional Genomics Resources

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Protein Alignment ro and LOC1281556

DIOPT Version :10

Sequence 1:NP_524521.1 Gene:ro / 43234 FlyBaseID:FBgn0003267 Length:350 Species:Drosophila melanogaster
Sequence 2:XP_061500013.1 Gene:LOC1281556 / 1281556 VectorBaseID:AGAMI1_000208 Length:433 Species:Anopheles gambiae


Alignment Length:403 Identity:96/403 - (23%)
Similarity:139/403 - (34%) Gaps:144/403 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PDGSPGIK---------------RSDSLDPIANTTILSVPQRPSSPRQFFERLYG-HLETRSSE- 58
            |...||::               |..||.|..|.:|..:|:.|.|       |.| |...||.| 
Mosquito    71 PGSGPGVRTPSPLASESYSVRLNRLQSLSPPHNYSITRLPESPQS-------LEGSHASVRSLEA 128

  Fly    59 --------------NGEIDVGTHAHK---------PPPCDT-----------------PYHSDGG 83
                          .|.:.:.....:         |||..|                 |.| ..|
Mosquito   129 LQSRLSPPVSHTVSPGAVPLSLKRPRSSSPPVSPPPPPPATGVVGLGGGPQGGGGPVPPAH-PAG 192

  Fly    84 SVSSPDI--------SISDERTSLAAYPAYDFYG----HAKDYPQ--HPSQQHQQHHHHHHHPPQ 134
            .:..|.:        .:|..:.:..|:||..  |    ..|..|.  |..:..|..|:.|....|
Mosquito   193 PIVVPGLPPGLVRPFPVSPSQHAPGAHPAQP--GGPQPELKSLPPFLHTPEMVQAAHNQHFLAAQ 255

  Fly   135 LVHQKLSYVSP----PPAIAAGGAANPVLP--------------H---AFPAGFPSDPHFSAGFS 178
            .....|::...    ||..||....||.:|              |   .||.|||.:        
Mosquito   256 FQAAALAHAQAGQPFPPHPAAAHLHNPNMPPRDSYPLYPWLLSRHGRGVFPIGFPGN-------- 312

  Fly   179 AFLARRRRKEGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNRR 243
             :|...|    :.:|.||.||..|.|:||..|..|.|:..:.|.:||:.|.|:|||:|:||||||
Mosquito   313 -YLIPFR----KSKRVRTAFSPSQLLKLEHAFESNHYVVGAERKQLAQNLNLSETQVKVWFQNRR 372

  Fly   244 AKDKRIEKAQIDQHYRNFVVANGFMSSIMGQAATTMPPGGVTGGVAVGVGLNYYAAAATPAALPK 308
            .|.||:::.:                            ||...|.:.. |.:...:|::|.....
Mosquito   373 TKHKRMQQEE----------------------------GGSGSGKSTD-GDHQNRSASSPTGSCD 408

  Fly   309 DNTQDANFIDIDD 321
            :...:..|||:||
Mosquito   409 EEDDEDEFIDMDD 421

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
roNP_524521.1 Homeodomain 196..248 CDD:459649 26/51 (51%)
LOC1281556XP_061500013.1 None

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