Protein Alignment ro and pdx1

DIOPT Version :9

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: XP_002934065.1
• Gene: pdx1 / 100490648
• XenbaseID: XB-GENE-483331
• Length: 271
• Species: Xenopus tropicalis
• Alignment Length: 204
• Identity: 71/204 - (34%)
• Similarity: 85/204 - (41%)
• Gaps: 53/204 - (25%)

  Fly    71 PPPC-------DTPYHS-----DGGSVSSPDIS------ISDERTSLAAYPAYDFYGHAKDYPQH 117
            ||.|       ...|.:     |.|  |.||||      ||:|                   |..
 Frog    32 PPACLYMGRQQQAAYSNPLVALDPG--SPPDISPYEVPPISEE-------------------PIV 75

  Fly   118 PSQQHQQHHHHHHHP--PQLVHQKLSYVSPPPAIAAGGAANPVLPHAFPAGFPSDPHF----SAG 176
            |...|..||||||||  |. .||::.:.....:.........:||  ||....:..|.    ..|
 Frog    76 PHLHHHHHHHHHHHPGIPH-PHQQMPFPDDTESATLEERNRTLLP--FPWMKSTKSHTWKGQWTG 137

  Fly   177 FSAFLARRRRKEGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQN 241
            .|..:.:...|     |.||.::..|.|.||.||..|:||||.||.|||..|.|||..|||||||
 Frog   138 GSYIMEQEENK-----RTRTAYTRAQLLELEKEFLFNKYISRPRRVELAVMLNLTERHIKIWFQN 197

  Fly   242 RRAKDKRIE 250
            ||.|.|:.|
 Frog   198 RRMKWKKEE 206

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeobox	196..247	CDD:278475	31/50 (62%)
pdx1	XP_002934065.1	Homeobox	150..204	CDD:365835	32/53 (60%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	1	1.000