Protein Alignment ro and hoxa2

DIOPT Version :9

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: XP_004915456.1
• Gene: hoxa2 / 100038099
• XenbaseID: XB-GENE-488087
• Length: 373
• Species: Xenopus tropicalis
• Alignment Length: 228
• Identity: 67/228 - (29%)
• Similarity: 97/228 - (42%)
• Gaps: 41/228 - (17%)

  Fly    45 FERLYGHLETRSSENGEIDVGTHAHKPPPCDTPYHSDGGSVSSPDISISD------ERTSLAAYP 103
            |||..|.:      |.:..:.......||....:.|  .|:.|..:|.|.      |:|..:..|
 Frog     5 FEREIGFI------NSQPSLAECLTSFPPVGDTFQS--SSIKSSALSHSTLIPPPFEQTIPSLNP 61

  Fly   104 AYDFYGHAKDYPQHPSQQHQQHHHHHHH------PPQ---LVHQKLSYVSPPPAIAAGGAANPVL 159
            .        .:|:|...:|..:.|....      ||:   :..:|.|..:|..|..|..||:
 Frog    62 G--------SHPRHSRPKHSPNGHGDSPVPAGSLPPEYPWMKEKKASKKAPIAAATAAAAAS--- 115

  Fly   160 PHAFPAGFPSDPHFSAGFSAFLARRRRKEGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFEL 224
              |.||......|     ...:..:....|..||.||.::..|.|.||.|||.|:|:.|.||.|:
 Frog   116 --AAPATTACLSH-----KEIIEIQDNSSGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEI 173

  Fly   225 AETLRLTETQIKIWFQNRRAKDKRIEKAQIDQH 257
            |..|.|||.|:|:||||||.|.||..:.:.:|:
 Frog   174 AALLDLTERQVKVWFQNRRMKHKRQTQCKENQN 206

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeobox	196..247	CDD:278475	28/50 (56%)
hoxa2	XP_004915456.1	Homeobox	144..197	CDD:365835	29/52 (56%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910