Protein Alignment ro and hoxa2

DIOPT Version :10

• Sequence 1: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Sequence 2: XP_004915456.1
• Gene: hoxa2 / 100038099
• XenbaseID: XB-GENE-488087
• Length: 373
• Species: Xenopus tropicalis
• Alignment Length: 228
• Identity: 67/228 - (29%)
• Similarity: 97/228 - (42%)
• Gaps: 41/228 - (17%)

  Fly    45 FERLYGHLETRSSENGEIDVGTHAHKPPPCDTPYHSDGGSVSSPDISISD------ERTSLAAYP 103
            |||..|.:      |.:..:.......||....:.|  .|:.|..:|.|.      |:|..:..|
 Frog     5 FEREIGFI------NSQPSLAECLTSFPPVGDTFQS--SSIKSSALSHSTLIPPPFEQTIPSLNP 61

  Fly   104 AYDFYGHAKDYPQHPSQQHQQHHHHHHH------PPQ---LVHQKLSYVSPPPAIAAGGAANPVL 159
            .        .:|:|...:|..:.|....      ||:   :..:|.|..:|..|..|..||:
 Frog    62 G--------SHPRHSRPKHSPNGHGDSPVPAGSLPPEYPWMKEKKASKKAPIAAATAAAAAS--- 115

  Fly   160 PHAFPAGFPSDPHFSAGFSAFLARRRRKEGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFEL 224
              |.||......|     ...:..:....|..||.||.::..|.|.||.|||.|:|:.|.||.|:
 Frog   116 --AAPATTACLSH-----KEIIEIQDNSSGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEI 173

  Fly   225 AETLRLTETQIKIWFQNRRAKDKRIEKAQIDQH 257
            |..|.|||.|:|:||||||.|.||..:.:.:|:
 Frog   174 AALLDLTERQVKVWFQNRRMKHKRQTQCKENQN 206

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ro	NP_524521.1	Homeodomain	196..248	CDD:459649	28/51 (55%)
hoxa2	XP_004915456.1	Homeodomain	141..197	CDD:459649	31/55 (56%)