DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5500 and AT5G17280

DIOPT Version :9

Sequence 1:NP_651511.1 Gene:CG5500 / 43233 FlyBaseID:FBgn0039461 Length:167 Species:Drosophila melanogaster
Sequence 2:NP_197230.1 Gene:AT5G17280 / 831593 AraportID:AT5G17280 Length:135 Species:Arabidopsis thaliana


Alignment Length:118 Identity:31/118 - (26%)
Similarity:46/118 - (38%) Gaps:31/118 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLAPLGFSCPRCLLLRRGAERWA----SLARQLSGSSSQDDASSK---DAAAQEAASGCPPNSTT 58
            :|..:.|...|.|.|:|....::    |..:||....:.....||   :|:.:|           
plant    23 VLLSMRFGLTRHLPLKRSFSNYSITSVSPEQQLKSPVTMATTESKNLVEASKEE----------- 76

  Fly    59 TGTDTPKAKDKTTKGRKRLRNIEIP-----PEPTTCCMSGCANCVWLDYAQTL 106
              |:..:.:||...|      :.:|     |||..||.|||..|||..|...|
plant    77 --TNKKETEDKKEVG------VSVPPPPEKPEPGDCCGSGCVRCVWDVYYDEL 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5500NP_651511.1 Oxidored-like <83..>103 CDD:286830 12/24 (50%)
AT5G17280NP_197230.1 Oxidored-like <103..129 CDD:401663 10/19 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005892
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X4278
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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