Protein Alignment Rb97D and NOP13

DIOPT Version :10

• Sequence 1: NP_524520.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_014224.2
• Gene: NOP13 / 855547
• SGDID: S000005119
• Length: 403
• Species: Saccharomyces cerevisiae
• Alignment Length: 279
• Identity: 56/279 - (20%)
• Similarity: 122/279 - (43%)
• Gaps: 50/279 - (17%)

  Fly     6 PLSDESADVIVLADREEDDICELEHLRKLFIGGLAPYTTEENLKLFY--------GQWGKVVDV- 61
            |..|||.:|:....::|:..       .::||.|:..||:::|..|:        .:..:|.:.
Yeast   106 PTGDESGEVVKKKKKDENKY-------GVWIGNLSFDTTKDDLVRFFIAKTKDNEDEKSRVTEQD 163

  Fly    62 --------VVMRDAATKRSRGFGFITYTKSLMVDRAQENRPHIIDGKTV---EAKRALPRPERE- 114
                    |..:::...:::||.::.:.....:....|.....::|:.:   :::....||:::
Yeast   164 ITRLSMPRVAAKNSNAMKNKGFCYMFFKNVEQMKAVLELSESHLNGRNMLIKDSENYSGRPDKDD 228

  Fly   115 --SRETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAV 177
              :...|...:.||||.|..:..::.||::|...|::|.:::.|.:.:||.:||||::|.:.:..
Yeast   229 LVAMSKNPPSRILFVGNLSFDVTDDLLRKHFQHCGDIVKIRMATFEDSGKCKGFAFIDFKNEEGS 293

  Fly   178 DKAILKKQHAIKYVHVDVKKSIYNLDKKEKQQPGGLANA---------IKPSLNQQQQQQGGGQQ 233
            ..|:  |..:.:.:.....:..|..|:.::|....:.|.         |..:....:..|..|.:
Yeast   294 TNAL--KDKSCRKIAGRPLRMEYGEDRSKRQVRKKVENVSRNNSSSFDISNNKGYDRAGQDNGSK 356

  Fly   234 P----PNGNMQAPSFRPPV 248
            |    .|.|.     ||||
Yeast   357 PEYKRSNANR-----RPPV 370

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_524520.1	RRM2_hnRNPA_like	124..196	CDD:409766	20/71 (28%)
		RRM_SF	33..110	CDD:473069	13/96 (14%)
NOP13	NP_014224.2	RRM1_Nop13p_fungi	127..217	CDD:409830	13/89 (15%)
		RRM2_Nop13p_fungi	241..316	CDD:409831	21/76 (28%)