Protein Alignment Rb97D and HRP1

DIOPT Version :9

• Sequence 1: NP_001014671.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_014518.1
• Gene: HRP1 / 853997
• SGDID: S000005483
• Length: 534
• Species: Saccharomyces cerevisiae
• Alignment Length: 469
• Identity: 132/469 - (28%)
• Similarity: 187/469 - (39%)
• Gaps: 120/469 - (25%)

  Fly     5 EPLSDESADVIVLADREEDDICEL-EHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAA 68
            :|.|.......|...:||....:| :...|:|||||...|||:||:.::|::|.|.|:.:|:|.|
Yeast   131 QPSSQSPPQQQVTQTKEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPA 195

  Fly    69 TKRSRGFGFITYTKSLMVDRAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDN 133
            |.|||||||:::.|...||...:.: ||:|||.::.|||:||.|::      ...|:||||:..:
Yeast   196 TGRSRGFGFLSFEKPSSVDEVVKTQ-HILDGKVIDPKRAIPRDEQD------KTGKIFVGGIGPD 253

  Fly   134 HDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVKKS 198
            ...:...|:|.|:|.::..:|:.||.||:.|||.||.:|..||||:....|....|...:::|::
Yeast   254 VRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRA 318

  Fly   199 IYNLDKKEKQQPGGLANAIKPSLNQQQQQQGGGQQPPNG-NMQAPSFRPPVPPQQAMGPYQQQPP 262
                               :|...||:....||....|. |.:..:|       ...|.:.|...
Yeast   319 -------------------EPRHMQQKSSNNGGNNGGNNMNRRGGNF-------GNQGDFNQMYQ 357

  Fly   263 PAPMSAPPPNFNYWGPPPPAMPPYYQ---------------------QPPPQQMNGWGP--YPPP 304
            ...|....|..|     |.||..|||                     |...|||....|  ..||
Yeast   358 NPMMGGYNPMMN-----PQAMTDYYQKMQEYYQQMQKQTGMDYTQMYQQQMQQMAMMMPGFAMPP 417

  Fly   305 QQNGWNAPPPPPPGAQQWHANQWGCPPP-------VQQVPPVGAVPPPMGHNGPPPTAPGNWNMP 362
            .....|.|      .|..:|.| |.|.|       ...|..:|.....  .:|.||.     |:|
Yeast   418 NAMTLNQP------QQDSNATQ-GSPAPSDSDNNKSNDVQTIGNTSNT--DSGSPPL-----NLP 468

  Fly   363 PPVPGAAPPSHQQQSSQQPTPQPNFGTGYQQNYG---------------GGPSKHNNMNA----N 408
               .|...||       |.....|.|.||.::.|               ||..:.|....    |
Yeast   469 ---NGPKGPS-------QYNDDHNSGYGYNRDRGDRDRNDRDRDYNHRSGGNHRRNGRGGRGGYN 523

  Fly   409 RMNPYSAGPPNSYH 422
            |.|       |.||
Yeast   524 RRN-------NGYH 530

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_001014671.1	RRM1_hnRNPA_like	33..110	CDD:241022	37/76 (49%)
		RRM2_hnRNPA_like	124..196	CDD:240774	26/71 (37%)
HRP1	NP_014518.1	PABP-1234	<144..463	CDD:130689	107/365 (29%)
		RRM1_Hrp1p	161..236	CDD:409991	36/75 (48%)
		RRM2_Hrp1p	244..321	CDD:409767	27/95 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	182	1.000	Inparanoid score	I949
Isobase	1	0.950	-	0	Normalized mean entropy	S742
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.910