Protein Alignment Rb97D and AT1G78260

DIOPT Version :10

• Sequence 1: NP_524520.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_565175.1
• Gene: AT1G78260 / 844161
• AraportID: AT1G78260
• Length: 287
• Species: Arabidopsis thaliana
• Alignment Length: 300
• Identity: 74/300 - (24%)
• Similarity: 107/300 - (35%)
• Gaps: 94/300 - (31%)

  Fly   124 KLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAI 188
            |:|||||......:.:|.||.|||.::...::|||.|||.:|:.||.|.:.|:..:|:......|
plant    18 KVFVGGLAWETPTDEMRRYFEQFGEILEAVIITDKNTGKSKGYGFVTFRESDSATRAVADPNPVI 82

  Fly   189 KYVHVDVKKSIYNLDKKEKQQPGGLANAIKPSLNQQQQQQGGGQQPPNGNMQAPSFRPPVPPQ-Q 252
                 |.:|:..|:....:.:|                      .||.|..|..|     |.| |
plant    83 -----DGRKANCNIASFGRPRP----------------------SPPRGRGQTGS-----PSQYQ 115

  Fly   253 AMGP--YQQQPPPAPMSAPP----PNFNYWGPPPP------------AMPPYYQQPPPQQMNGWG 299
            :.||  |.....|.|.:|.|    |::.|...|..            ....||||  .||:.|.|
plant   116 SGGPSTYTGMAAPLPPAAAPQLMYPSYGYTYNPDQFGYHQALYNTQLQQAQYYQQ--QQQLYGGG 178

  Fly   300 P----------YPPPQQNGWN--APP---------PPPPGAQQWHANQWGCPPPVQQVPPVGAVP 343
            .          .|.|...|::  ||.         |.|...||.|..::..|..:
plant   179 ATSPSSSGATIMPSPYYYGYSLQAPRVPYQHHHHLPQPYNPQQHHHQRFSSPSFL---------- 233

  Fly   344 PPMGHNGPPPTAPGNWNMPPPVPGAAPPSHQQQSSQQPTP 383
                      ..|.|.:..||:.|....|.:.::..|..|
plant   234 ----------VYPSNSSFAPPLQGVLSSSTESEAVPQQVP 263

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_524520.1	RRM2_hnRNPA_like	124..196	CDD:409766	26/71 (37%)
		RRM_SF	33..110	CDD:473069
AT1G78260	NP_565175.1	RRM_RBM24_RBM38_like	17..92	CDD:409818	28/78 (36%)