Protein Alignment Rb97D and AT1G76460

DIOPT Version :10

• Sequence 1: NP_524520.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_565132.2
• Gene: AT1G76460 / 843979
• AraportID: AT1G76460
• Length: 285
• Species: Arabidopsis thaliana
• Alignment Length: 262
• Identity: 74/262 - (28%)
• Similarity: 108/262 - (41%)
• Gaps: 58/262 - (22%)

  Fly   124 KLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAI 188
            |:|||||......|.||::|.|:|.::...::.||.||:.:|:.||.|.|.:|..:|.......|
plant    25 KVFVGGLAWETQSETLRQHFEQYGEILEAVVIADKNTGRSKGYGFVTFRDPEAARRACADPTPII 89

  Fly   189 KYVHVDVKKSIYNLDKKEKQQPGGLANAIKPSLNQQQQQQGGGQQPPN---GNMQAP--SFRPPV 248
                 |.:::..||....:.:| .|..|:.|::       .|..:|.:   ||:|.|  |.....
plant    90 -----DGRRANCNLASLGRPRP-PLPYAVIPNM-------PGRLRPASPYIGNVQGPRGSLIGNY 141

  Fly   249 PPQQAMGPYQQQPP---PAPMSAPPPNFNY------------------WGPPPPAMPPYYQQPPP 292
            |.||.: ||..|..   |..::|..|.:.|                  :|.|.....|.||....
plant   142 PYQQPL-PYNYQQGVVYPYGVTAYGPEYMYSQSQGLYSPYMGQQYLQVYGVPGAVNSPVYQYGQL 205

  Fly   293 QQM--NGWGPYPPPQQNGWNAPPPPPPGAQQWHANQWGCPP----PVQQVPPVGAVPPPMGHNGP 351
            .|.  ||.| |...|  |::.     ||:   |..|.|.|.    ....:|.:.| |.|.|..||
plant   206 SQTIPNGHG-YTAVQ--GYSV-----PGS---HILQLGGPTVSTMTTSSMPALQA-PYPSGIPGP 258

  Fly   352 PP 353
            .|
plant   259 AP 260

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_524520.1	RRM2_hnRNPA_like	124..196	CDD:409766	25/71 (35%)
		RRM_SF	33..110	CDD:473069
AT1G76460	NP_565132.2	RRM_RBM24_RBM38_like	24..99	CDD:409818	26/78 (33%)
		PABP-1234	<37..245	CDD:130689	60/232 (26%)