Protein Alignment Rb97D and UBP1A

DIOPT Version :10

• Sequence 1: NP_524520.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_849806.1
• Gene: UBP1A / 841846
• AraportID: AT1G54080
• Length: 430
• Species: Arabidopsis thaliana
• Alignment Length: 275
• Identity: 63/275 - (22%)
• Similarity: 95/275 - (34%)
• Gaps: 95/275 - (34%)

  Fly    34 LFIGGLAPYTTE----ENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITY-------------- 80
            :|:|.|:|..|:    ::...|........|..||.|..|.|||||||:::
plant   150 IFVGDLSPEVTDAALFDSFSAFNSCSSYYRDARVMWDQKTGRSRGFGFVSFRNQQDAQTAINEMN 214

  Fly    81 -----TKSLMVDRAQENR-----PHIIDGKTV--------EAKRALPRPERESRETNISVKKLFV 127
                 ::.:..:.|.:..     .|..|||:|        |..|.|  ...::.|.|.....::|
plant   215 GKWVSSRQIRCNWATKGATFGEDKHSSDGKSVVELTNGSSEDGREL--SNEDAPENNPQFTTVYV 277

  Fly   128 GGLKDNHDEECLRE--YFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKY 190
            |.|.....:..|..  |.|..|.:..|::..||      ||.||.::.:|....||
plant   278 GNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDK------GFGFVRYNTHDEAALAI--------- 327

  Fly   191 VHVDVKKSIYNLDKKEKQQPGGLANAIKPSLNQQQQQQGGGQQP-PNGNMQAPSFRPPVPPQQAM 254
                                 .:.|| :|.|..:|.:...|.:| |:|....|
plant   328 ---------------------QMGNA-QPFLFSRQIRCSWGNKPTPSGTASNP------------ 358

  Fly   255 GPYQQQPPPAPMSAP 269
                 .|||||.|.|
plant   359 -----LPPPAPASVP 368

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_524520.1	RRM2_hnRNPA_like	124..196	CDD:409766	17/73 (23%)
		RRM_SF	33..110	CDD:473069	27/111 (24%)
UBP1A	NP_849806.1	RRM1_PUB1	65..135	CDD:410026
		RRM2_PUB1	147..230	CDD:410031	19/79 (24%)
		RRM_SF	273..349	CDD:473069	23/112 (21%)