Sequence 1: | NP_001014671.1 | Gene: | Rb97D / 43231 | FlyBaseID: | FBgn0004903 | Length: | 471 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006246407.1 | Gene: | Hnrnpab / 83498 | RGDID: | 69255 | Length: | 332 | Species: | Rattus norvegicus |
Alignment Length: | 276 | Identity: | 86/276 - (31%) |
---|---|---|---|
Similarity: | 134/276 - (48%) | Gaps: | 41/276 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 DVIVLADREEDDICELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGF 77
Fly 78 ITYTKSLMVDRAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLREY 142
Fly 143 FLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVK----KSIYNLD 203
Fly 204 KKEKQQPGGLANAIKPSLNQQQQQQGGGQQPPNGNMQAPSFRPPVPPQQAMGP----YQQQPPPA 264
Fly 265 PMSAPPPNFNYWGPPP 280 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rb97D | NP_001014671.1 | RRM1_hnRNPA_like | 33..110 | CDD:241022 | 29/76 (38%) |
RRM2_hnRNPA_like | 124..196 | CDD:240774 | 30/71 (42%) | ||
Hnrnpab | XP_006246407.1 | CBFNT | 1..75 | CDD:311868 | 5/18 (28%) |
RRM1_hnRNPAB | 71..150 | CDD:410151 | 31/85 (36%) | ||
RRM2_hnRNPAB | 155..234 | CDD:409997 | 33/85 (39%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1202220at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.920 |