Protein Alignment Rb97D and Hnrnpab

DIOPT Version :10

• Sequence 1: NP_524520.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: XP_063126030.1
• Gene: Hnrnpab / 83498
• RGDID: 69255
• Length: 332
• Species: Rattus norvegicus
• Alignment Length: 276
• Identity: 86/276 - (31%)
• Similarity: 134/276 - (48%)
• Gaps: 41/276 - (14%)

  Fly    13 DVIVLADREEDDICELEHLRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGF 77
            |.|..:..|||       ..|:|:|||:..|::::||.::.::|:|||..:..|..|.|||||||
  Rat    63 DQINASKNEED-------AGKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGF 120

  Fly    78 ITYTKSLMVDRAQENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLREY 142
            |.:..|..|::..:.:.|.:||:.::.|:|:...:.       .|||:|||||.....||.:|||
  Rat   121 ILFKDSSSVEKVLDQKEHRLDGRVIDPKKAMAMKKD-------PVKKIFVGGLNPEATEEKIREY 178

  Fly   143 FLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVK----KSIYNLD 203
            |.|||.:.:::|..|....|||||.|:.|.:.|.|.|.:.||.|.:.....::|    |.:|
  Rat   179 FGQFGEIEAIELPIDPKLNKRRGFVFITFKEEDPVKKVLEKKFHTVSGSKCEIKVAQPKEVY--- 240

  Fly   204 KKEKQQPGGLANAIKPSLNQQQQQQGGGQQPPNGNMQAPSFRPPVPPQQAMGP----YQQQPPPA 264
            ::::...||..|.     |:..:..||||...........:......||..||    |...|
  Rat   241 QQQQYGSGGRGNR-----NRGNRGSGGGQSQSWNQGYGNYWNQGYGYQQGYGPGYGGYDYSP--- 297

  Fly   265 PMSAPPPNFNYWGPPP 280
                    :.|:|..|
  Rat   298 --------YGYYGYGP 305

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_524520.1	RRM2_hnRNPA_like	124..196	CDD:409766	30/71 (42%)
		RRM_SF	33..110	CDD:473069	29/76 (38%)
Hnrnpab	XP_063126030.1	None