Protein Alignment Rb97D and AT5G40490

DIOPT Version :10

• Sequence 1: NP_524520.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_198865.1
• Gene: AT5G40490 / 834047
• AraportID: AT5G40490
• Length: 423
• Species: Arabidopsis thaliana
• Alignment Length: 478
• Identity: 121/478 - (25%)
• Similarity: 184/478 - (38%)
• Gaps: 131/478 - (27%)

  Fly     7 LSDESADVIVLADREEDDICELEH-------LRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVM 64
            :.||..|.....|.|:||.....|       ..|:|:||||..||.......:|::|::.|.|:|
plant    10 IEDEIHDPKPSEDIEDDDDKSQPHSGGGVDSAGKIFVGGLARETTSAEFLKHFGKYGEITDSVIM 74

  Fly    65 RDAATKRSRGFGFITYTKSLMVDRA-QENRPHIIDGKTVEAKRALPRPERESRETNISVKKLFVG 128
            :|..|.:.|||||:||..|.:||:. |:|  |||.||.||.||.:||....|.:  ...||:|||
plant    75 KDRKTGQPRGFGFVTYADSSVVDKVIQDN--HIIIGKQVEIKRTIPRGSMSSND--FKTKKIFVG 135

  Fly   129 GLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKY--V 191
            |:..:.|::..:|:|:|||.:...:::.|.:||:.|||.||.::..|.||. :|.|.:.|:.  .
plant   136 GIPSSVDDDEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDH-LLAKGNRIELSGT 199

  Fly   192 HVDVKKSIYNLDKKEKQQPGGLANAIKPSLNQQQQQQGGGQQPPNGNMQAPSFRPPVPPQQAMGP 256
            .|::||:       |.::|..:....| .....:...|||.....|......:..|..|.::.|
plant   200 QVEIKKA-------EPKKPNSVTTPSK-RFGDSRSNFGGGYGDGYGGGHGGGYGGPGGPYKSGG- 255

  Fly   257 YQQQPPPAPMSAPPPNFNYWGPPPPAMPPYYQQPPPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQ 321
                             .|.|               .:..|:|.|
plant   256 -----------------GYGG---------------GRSGGYGGY-------------------- 268

  Fly   322 WHANQWGCPPPVQQVPPVGAVPPPMGHNGPPPTAPGNWNMPPPVPGAAPPSHQQQSSQQPTPQPN 386
              ..::|                  |:.|      |.:.      |...|...:.:
plant   269 --GGEFG------------------GYGG------GGYG------GGVGPYRGEPA--------- 292

  Fly   387 FGTGYQQNYGGGPSKHN----NMNANRMNPYSAGPPNSYHTPQPPAYTGYNAGPLPPNGSVPPPT 447
              .||...||||...:|    :|...  ..|..||.:.|.........||..    |:||.....
plant   293 --LGYSGRYGGGGGGYNRGGYSMGGG--GGYGGGPGDMYGGSYGEPGGGYGG----PSGSYGGGY 349

  Fly   448 GAKAVGVSNGSVATGGSANSKYR 470
            |:..:|...|.:  ||:....||
plant   350 GSSGIGGYGGGM--GGAGGGGYR 370

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_524520.1	RRM2_hnRNPA_like	124..196	CDD:409766	26/73 (36%)
		RRM_SF	33..110	CDD:473069	36/77 (47%)
AT5G40490	NP_198865.1	RRM_SF	44..114	CDD:473069	33/71 (46%)
		RRM_SF	131..209	CDD:473069	29/85 (34%)