Protein Alignment Rb97D and ATRBP45C

DIOPT Version :10

• Sequence 1: NP_524520.1
• Gene: Rb97D / 43231
• FlyBaseID: FBgn0004903
• Length: 471
• Species: Drosophila melanogaster
• Sequence 2: NP_567764.1
• Gene: ATRBP45C / 828808
• AraportID: AT4G27000
• Length: 415
• Species: Arabidopsis thaliana
• Alignment Length: 303
• Identity: 76/303 - (25%)
• Similarity: 108/303 - (35%)
• Gaps: 94/303 - (31%)

  Fly    29 EHLRKLFIGGLAPYTTEENL-KLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQ-- 90
            ||  .:|:|.|||..|:..| :.|...:..|....|:.|..|.||:|:||:.:.......||.
plant   172 EH--TVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTE 234

  Fly    91 ------ENRPHIIDGKTVEAKRALPRP---------ERESRETNISVKKLFVGGLKDNHDEECLR 140
                  .:|| :..|.....|....:|         ..||..||.::   |||.:..:..|:.|:
plant   235 MNGQYCSSRP-MRTGPAANKKPLTMQPASYQNTQGNSGESDPTNTTI---FVGAVDQSVTEDDLK 295

  Fly   141 EYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVKKSIYNLDKK 205
            ..|.|||.:|.||:    ..|||.|  ||::.:....::|:                |:.|
plant   296 SVFGQFGELVHVKI----PAGKRCG--FVQYANRACAEQAL----------------SVLN---- 334

  Fly   206 EKQQPGGLANAIKPSLNQQQQQQGGGQQPPNGNMQAPSFRPPVPPQQAMGPYQQQPPPAPMSAPP 270
             ..|.||           |..:...|:.|.|...|        |.|...|
plant   335 -GTQLGG-----------QSIRLSWGRSPSNKQTQ--------PDQAQYG--------------- 364

  Fly   271 PNFNYWGPPPPAMPPYYQQPPPQQMN---------GWGPYPPP 304
            ....|:|.||.....|...||||..|         |:|.|..|
plant   365 GGGGYYGYPPQGYEAYGYAPPPQDPNAYYGGYAGGGYGNYQQP 407

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_524520.1	RRM2_hnRNPA_like	124..196	CDD:409766	19/71 (27%)
		RRM_SF	33..110	CDD:473069	23/85 (27%)
ATRBP45C	NP_567764.1	RRM1_SECp43_like	81..158	CDD:409780
		RRM2_SECp43_like	172..251	CDD:409781	24/81 (30%)
		RRM_SF	277..348	CDD:473069	26/111 (23%)