Sequence 1: | NP_001014671.1 | Gene: | Rb97D / 43231 | FlyBaseID: | FBgn0004903 | Length: | 471 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001190109.1 | Gene: | UBA2A / 824853 | AraportID: | AT3G56860 | Length: | 478 | Species: | Arabidopsis thaliana |
Alignment Length: | 417 | Identity: | 102/417 - (24%) |
---|---|---|---|
Similarity: | 156/417 - (37%) | Gaps: | 106/417 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 DEPLSD---------------ESADVIV-LADR-----EEDDICELEHLRKLFIGGLAPYTTEEN 47
Fly 48 LKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQENRPH----------------- 95
Fly 96 IIDGKTVEAKRALPRPERESRETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTT 160
Fly 161 GKRRGFAFVEFDDYDAVDKAILKKQHAIKYVHVDVKKSIYNLDKKEKQQ-----PGGLANAIKPS 220
Fly 221 LNQQQQQQGGGQQPPNGNMQAPSFRPP---VPPQQAMGPYQQQPPPAPMSAPPPN--FNYWGPPP 280
Fly 281 PA----------------------MPPYY--QQPPPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQ 321
Fly 322 WHANQWGCPPPVQQVPPVGAVPPPMGH 348 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rb97D | NP_001014671.1 | RRM1_hnRNPA_like | 33..110 | CDD:241022 | 24/93 (26%) |
RRM2_hnRNPA_like | 124..196 | CDD:240774 | 18/71 (25%) | ||
UBA2A | NP_001190109.1 | PABP-1234 | 136..>347 | CDD:130689 | 55/225 (24%) |
RRM_SF | 140..215 | CDD:418427 | 22/75 (29%) | ||
Med15 | 361..>465 | CDD:312941 | 24/113 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1202220at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |