DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rb97D and CP29

DIOPT Version :9

Sequence 1:	NP_001014671.1	Gene:	Rb97D / 43231	FlyBaseID:	FBgn0004903	Length:	471	Species:	Drosophila melanogaster
Sequence 2:	NP_001190079.1	Gene:	CP29 / 824514	AraportID:	AT3G53460	Length:	363	Species:	Arabidopsis thaliana

Alignment Length:	237	Identity:	50/237 - (21%)
Similarity:	77/237 - (32%)	Gaps:	88/237 - (37%)

- Green bases have known domain annotations that are detailed below.

  Fly    33 KLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVD-RAQENRPHI 96
            |||:|.|:.......|...:...|.|..|.|:.|..|.|||||||:|.:.:..|: .||:...::
plant   100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYV 164

  Fly    97 ---------------------IDGKTVEAKRALPRPERE-------------------------- 114
                                 .:|:.:......|.|:||
plant   165 SRYLCSLLCLYLLIRVLCGLEFEGRPLRVNAGPPPPKREESFSRGPRSGGYGSERGGGYGSERGG 229

  Fly   115 ----------------------------------------SRETNISVKKLFVGGLKDNHDEECL 139
                                                    |...:.|..:|:||.|....|:..|
plant   230 GYGSERGGGYGSERGGGYGSQRSGGGYGGSQRSSYGSGSGSGSGSGSGNRLYVGNLSWGVDDMAL 294

  Fly   140 REYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDAVDKAI 181
            ...|.:.|.||..:::.|:.:|:.:||.||.......|.|||
plant   295 ENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAI 336

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rb97D	NP_001014671.1	RRM1_hnRNPA_like	33..110	CDD:241022	24/98 (24%)
Rb97D	NP_001014671.1	RRM2_hnRNPA_like	124..196	CDD:240774	20/58 (34%)
CP29	NP_001190079.1	RRM_SF	100..194	CDD:302621	24/93 (26%)
CP29	NP_001190079.1	RRM_HP0827_like	279..355	CDD:240845	20/58 (34%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1202220at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920